Difference between revisions of "Test graph - BioConductor package dependancies"
(New page: ls NONE sigPathway R TypeInfo methods Biostrings R Biostrings methods Mfuzz R Mfuzz Biobase Mfuzz e1071 LMGene R LMGene Biobase LMGene multtest LMGene survival ecolitk R ecolitk affy ecoli...) |
|||
(16 intermediate revisions by 2 users not shown) | |||
Line 1: | Line 1: | ||
− | + | This graph shows the package dependencies for the BioConductor software for the statistical analysis of microarrary data in R. The dependency list was generated from the BioConductor-1.9 software repository HTML pages. | |
− | sigPathway R | + | |
− | TypeInfo methods | + | Unfortunately it is too large to be used on this webserver (due to memory limitations). A slightly shorter list (75%) would work. See also [[Test graph 2]] ... |
− | Biostrings R | + | |
− | Biostrings methods | + | {{#wgraph: png | thumb=40 | |
− | Mfuzz R | + | nodetype * { font helvR08 } |
− | Mfuzz Biobase | + | layoutalgorithm=forcedir |
− | Mfuzz e1071 | + | edge gpls NONE {} |
− | LMGene R | + | edge sigPathway R {} |
− | LMGene Biobase | + | edge TypeInfo methods {} |
− | LMGene multtest | + | edge Biostrings R {} |
− | LMGene survival | + | edge Biostrings methods {} |
− | ecolitk R | + | edge Mfuzz R {} |
− | ecolitk affy | + | edge Mfuzz Biobase {} |
− | ecolitk ecoliLeucine | + | edge Mfuzz e1071 {} |
− | ecolitk ecolicdf | + | edge LMGene R {} |
− | ecolitk Biobase | + | edge LMGene Biobase {} |
− | maCorrPlot NONE | + | edge LMGene multtest {} |
− | OLINgui R | + | edge LMGene survival {} |
− | OLINgui OLIN | + | edge ecolitk R {} |
− | xcms R | + | edge ecolitk affy {} |
− | xcms methods | + | edge ecolitk ecoliLeucine {} |
− | rflowcyt R | + | edge ecolitk ecolicdf {} |
− | rflowcyt survival | + | edge ecolitk Biobase {} |
− | rflowcyt xtable | + | edge maCorrPlot NONE {} |
− | rflowcyt stats | + | edge OLINgui R {} |
− | rflowcyt KernSmooth | + | edge OLINgui OLIN {} |
− | rflowcyt MASS | + | edge xcms R {} |
− | rflowcyt grid | + | edge xcms methods {} |
− | rflowcyt methods | + | edge rflowcyt R {} |
− | rflowcyt hexbin | + | edge rflowcyt survival {} |
− | rflowcyt rfcdmin | + | edge rflowcyt xtable {} |
− | rflowcyt fields | + | edge rflowcyt stats {} |
− | rflowcyt lattice | + | edge rflowcyt KernSmooth {} |
− | rflowcyt locfit | + | edge rflowcyt MASS {} |
− | daMA MASS | + | edge rflowcyt grid {} |
− | made4 ade4 | + | edge rflowcyt methods {} |
− | made4 scatterplot3d | + | edge rflowcyt hexbin {} |
− | biomaRt methods | + | edge rflowcyt rfcdmin {} |
− | biomaRt XML | + | edge rflowcyt fields {} |
− | biomaRt RCurl | + | edge rflowcyt lattice {} |
− | + | edge rflowcyt locfit {} | |
− | gaggle rJava | + | edge daMA MASS {} |
− | gaggle graph | + | edge made4 ade4 {} |
− | affylmGUI limma | + | edge made4 scatterplot3d {} |
− | affylmGUI tcltk | + | edge biomaRt methods {} |
− | affylmGUI affy | + | edge biomaRt XML {} |
− | affylmGUI Biobase | + | edge biomaRt RCurl {} |
− | + | edge gaggle rJava {} | |
− | SAGElyzer AnnBuilder | + | edge gaggle graph {} |
− | SAGElyzer tkWidgets | + | edge affylmGUI limma {} |
− | SAGElyzer genefilter | + | edge affylmGUI tcltk {} |
− | SAGElyzer annotate | + | edge affylmGUI affy {} |
− | GeneR NONE | + | edge affylmGUI Biobase {} |
− | + | edge SAGElyzer AnnBuilder {} | |
− | GeneSpring Biobase | + | edge SAGElyzer tkWidgets {} |
− | GeneSpring methods | + | edge SAGElyzer genefilter {} |
− | + | edge SAGElyzer annotate {} | |
− | geneplotter annotate | + | edge GeneR NONE {} |
− | geneplotter Biobase | + | edge GeneSpring Biobase {} |
− | geneplotter methods | + | edge GeneSpring methods {} |
− | + | edge geneplotter annotate {} | |
− | + | edge geneplotter Biobase {} | |
− | BioMVCClass methods | + | edge geneplotter methods {} |
− | BioMVCClass MVCClass | + | edge BioMVCClass methods {} |
− | BioMVCClass Biobase | + | edge BioMVCClass MVCClass {} |
− | BioMVCClass graph | + | edge BioMVCClass Biobase {} |
− | BioMVCClass Rgraphviz | + | edge BioMVCClass graph {} |
− | sizepower stats | + | edge BioMVCClass Rgraphviz {} |
− | PROcess Icens | + | edge sizepower stats {} |
− | snapCGH limma | + | edge PROcess Icens {} |
− | snapCGH tilingArray | + | edge snapCGH limma {} |
− | snapCGH DNAcopy | + | edge snapCGH tilingArray {} |
− | snapCGH aCGH | + | edge snapCGH DNAcopy {} |
− | snapCGH GLAD | + | edge snapCGH aCGH {} |
− | snapCGH cluster | + | edge snapCGH GLAD {} |
− | snapCGH methods | + | edge snapCGH cluster {} |
− | + | edge snapCGH methods {} | |
− | bioDist methods | + | edge bioDist methods {} |
− | bioDist Biobase | + | edge bioDist Biobase {} |
− | + | edge marray limma {} | |
− | marray limma | + | edge marray methods {} |
− | marray methods | + | edge tkWidgets methods {} |
− | + | edge tkWidgets widgetTools {} | |
− | tkWidgets methods | + | edge tkWidgets DynDoc {} |
− | tkWidgets widgetTools | + | edge rama NONE {} |
− | tkWidgets DynDoc | + | edge Ruuid methods {} |
− | rama NONE | + | edge arrayQuality marray {} |
− | Ruuid | + | edge arrayQuality limma {} |
− | + | edge arrayQuality convert {} | |
− | + | edge arrayQuality hexbin {} | |
− | arrayQuality marray | + | edge arrayQuality gridBase {} |
− | arrayQuality limma | + | edge arrayQuality RColorBrewer {} |
− | arrayQuality convert | + | edge GraphAT MCMCpack {} |
− | arrayQuality hexbin | + | edge GraphAT graph {} |
− | arrayQuality gridBase | + | edge beadarray limma {} |
− | arrayQuality RColorBrewer | + | edge beadarray Biobase {} |
− | GraphAT MCMCpack | + | edge beadarray affy {} |
− | GraphAT graph | + | edge beadarray methods {} |
− | beadarray limma | + | edge ppiStats apComplex {} |
− | beadarray Biobase | + | edge ppiStats GO {} |
− | beadarray affy | + | edge ppiStats GOstats {} |
− | beadarray methods | + | edge ppiStats YEAST {} |
− | ppiStats apComplex | + | edge ppiStats graph {} |
− | ppiStats GO | + | edge ppiStats Rgraphviz {} |
− | ppiStats GOstats | + | edge ppiStats Category {} |
− | ppiStats YEAST | + | edge pcaMethods MASS {} |
− | ppiStats graph | + | edge pcaMethods ellipse {} |
− | ppiStats Rgraphviz | + | edge pcaMethods pls {} |
− | ppiStats Category | + | edge pcaMethods methods {} |
− | + | edge GlobalAncova methods {} | |
− | pcaMethods MASS | + | edge webbioc Biobase {} |
− | pcaMethods ellipse | + | edge webbioc affy {} |
− | pcaMethods pls | + | edge webbioc multtest {} |
− | pcaMethods methods | + | edge webbioc annaffy {} |
− | + | edge webbioc vsn {} | |
− | GlobalAncova methods | + | edge webbioc gcrma {} |
− | + | edge webbioc qvalue {} | |
− | webbioc Biobase | + | edge cghMCR methods {} |
− | webbioc affy | + | edge cghMCR DNAcopy {} |
− | webbioc multtest | + | edge cghMCR marray {} |
− | webbioc annaffy | + | edge cghMCR arrayQuality {} |
− | webbioc vsn | + | edge widgetInvoke methods {} |
− | webbioc gcrma | + | edge widgetInvoke XML {} |
− | webbioc qvalue | + | edge widgetInvoke RGtk {} |
− | cghMCR methods | + | edge hexbin methods {} |
− | cghMCR DNAcopy | + | edge hexbin grid {} |
− | cghMCR marray | + | edge hexbin lattice {} |
− | cghMCR arrayQuality | + | edge hexbin colorspace {} |
− | widgetInvoke methods | + | edge matchprobes Biobase {} |
− | widgetInvoke XML | + | edge matchprobes affy {} |
− | widgetInvoke RGtk | + | edge siggenes methods {} |
− | + | edge siggenes multtest {} | |
− | hexbin methods | + | edge siggenes Biobase {} |
− | hexbin grid | + | edge AnnBuilder methods {} |
− | hexbin lattice | + | edge AnnBuilder Biobase {} |
− | hexbin colorspace | + | edge AnnBuilder XML {} |
− | + | edge AnnBuilder annotate {} | |
− | matchprobes Biobase | + | edge AnnBuilder utils {} |
− | matchprobes affy | + | edge AnnBuilder RSQLite {} |
− | siggenes methods | + | edge pamr NONE {} |
− | siggenes multtest | + | edge RBGL graph {} |
− | siggenes Biobase | + | edge RBGL methods {} |
− | + | edge biocViews methods {} | |
− | AnnBuilder methods | + | edge biocViews tools {} |
− | AnnBuilder Biobase | + | edge biocViews graph {} |
− | AnnBuilder XML | + | edge biocViews RBGL {} |
− | AnnBuilder annotate | + | edge biocViews XML {} |
− | AnnBuilder utils | + | edge CoCiteStats humanLLMappings {} |
− | AnnBuilder RSQLite | + | edge ChromoViz RSvgDevice {} |
− | pamr NONE | + | edge ChromoViz XML {} |
− | RBGL graph | + | edge GOstats graph {} |
− | RBGL methods | + | edge GOstats GO {} |
− | + | edge GOstats annotate {} | |
− | biocViews methods | + | edge GOstats RBGL {} |
− | biocViews tools | + | edge GOstats Biobase {} |
− | biocViews graph | + | edge GOstats Category {} |
− | biocViews RBGL | + | edge GOstats methods {} |
− | biocViews XML | + | edge prada Biobase {} |
− | + | edge prada RColorBrewer {} | |
− | CoCiteStats humanLLMappings | + | edge prada grid {} |
− | ChromoViz RSvgDevice | + | edge prada methods {} |
− | ChromoViz XML | + | edge prada geneplotter {} |
− | GOstats graph | + | edge bridge rama {} |
− | GOstats GO | + | edge ontoTools methods {} |
− | GOstats annotate | + | edge ontoTools graph {} |
− | GOstats RBGL | + | edge ontoTools SparseM {} |
− | GOstats Biobase | + | edge ontoTools GO {} |
− | GOstats Category | + | edge ontoTools Biobase {} |
− | GOstats methods | + | edge ontoTools annotate {} |
− | + | edge MCRestimate e1071 {} | |
− | prada Biobase | + | edge MCRestimate pamr {} |
− | prada RColorBrewer | + | edge MCRestimate randomForest {} |
− | prada grid | + | edge MCRestimate RColorBrewer {} |
− | prada methods | + | edge MCRestimate Biobase {} |
− | prada geneplotter | + | edge MCRestimate golubEsets {} |
− | + | edge aroma.light R.oo {} | |
− | bridge rama | + | edge pkgDepTools methods {} |
− | + | edge pkgDepTools graph {} | |
− | + | edge pkgDepTools RBGL {} | |
− | ontoTools methods | + | edge MeasurementError.cor NONE {} |
− | ontoTools graph | + | edge logicFS LogicReg {} |
− | ontoTools SparseM | + | edge copa Biobase {} |
− | ontoTools GO | + | edge copa methods {} |
− | ontoTools Biobase | + | edge Category Biobase {} |
− | ontoTools annotate | + | edge Category KEGG {} |
− | + | edge Category GO {} | |
− | MCRestimate e1071 | + | edge Category graph {} |
− | MCRestimate pamr | + | edge Category annotate {} |
− | MCRestimate randomForest | + | edge Category methods {} |
− | MCRestimate RColorBrewer | + | edge Category genefilter {} |
− | MCRestimate Biobase | + | edge Harshlight affy {} |
− | MCRestimate golubEsets | + | edge OrderedList Biobase {} |
− | aroma.light R.oo | + | edge OrderedList twilight {} |
− | pkgDepTools methods | + | edge MVCClass methods {} |
− | pkgDepTools graph | + | edge panp affy {} |
− | pkgDepTools RBGL | + | edge LPE NONE {} |
− | MeasurementError.cor NONE | + | edge MANOR GLAD {} |
− | + | edge RbcBook1 Biobase {} | |
− | + | edge vsn Biobase {} | |
− | + | edge iSPlot methods {} | |
− | copa Biobase | + | edge iSPlot RGtk {} |
− | copa methods | + | edge iSPlot gtkDevice {} |
− | Category Biobase | + | edge iSPlot MVCClass {} |
− | Category KEGG | + | edge pickgene MASS {} |
− | Category GO | + | edge makecdfenv methods {} |
− | Category graph | + | edge makecdfenv Biobase {} |
− | Category annotate | + | edge makecdfenv affy {} |
− | Category methods | + | edge makecdfenv utils {} |
− | Category genefilter | + | edge makecdfenv affyio {} |
− | + | edge aCGH cluster {} | |
− | Harshlight affy | + | edge aCGH survival {} |
− | + | edge aCGH multtest {} | |
− | OrderedList Biobase | + | edge aCGH sma {} |
− | OrderedList twilight | + | edge KEGGSOAP methods {} |
− | + | edge KEGGSOAP XML {} | |
− | MVCClass methods | + | edge KEGGSOAP SSOAP {} |
− | panp affy | + | edge KEGGSOAP RCurl {} |
− | LPE NONE | + | edge annotate methods {} |
− | + | edge annotate Biobase {} | |
− | MANOR GLAD | + | edge limma methods {} |
− | RbcBook1 Biobase | + | edge timecourse limma {} |
− | + | edge timecourse MASS {} | |
− | vsn Biobase | + | edge timecourse Biobase {} |
− | + | edge timecourse methods {} | |
− | iSPlot methods | + | edge nem e1071 {} |
− | iSPlot RGtk | + | edge nem graph {} |
− | iSPlot gtkDevice | + | edge nem Rgraphviz {} |
− | iSPlot MVCClass | + | edge nem RBGL {} |
− | pickgene MASS | + | edge HEM Biobase {} |
− | + | edge SBMLR XML {} | |
− | makecdfenv methods | + | edge SBMLR odesolve {} |
− | makecdfenv Biobase | + | edge MLInterfaces Biobase {} |
− | makecdfenv affy | + | edge MLInterfaces methods {} |
− | makecdfenv utils | + | edge MLInterfaces genefilter {} |
− | makecdfenv affyio | + | edge weaver digest {} |
− | + | edge weaver tools {} | |
− | aCGH cluster | + | edge weaver utils {} |
− | aCGH survival | + | edge weaver codetools {} |
− | aCGH multtest | + | edge goTools Biobase {} |
− | aCGH sma | + | edge goTools annotate {} |
− | KEGGSOAP methods | + | edge goTools GO {} |
− | KEGGSOAP XML | + | edge applera Biobase {} |
− | KEGGSOAP SSOAP | + | edge applera methods {} |
− | KEGGSOAP RCurl | + | edge applera affy {} |
− | + | edge applera genefilter {} | |
− | annotate methods | + | edge applera limma {} |
− | annotate Biobase | + | edge applera geneplotter {} |
− | + | edge applera RColorBrewer {} | |
− | limma methods | + | edge applera prada {} |
− | + | edge applera combinat {} | |
− | timecourse limma | + | edge annaffy methods {} |
− | timecourse MASS | + | edge annaffy Biobase {} |
− | timecourse Biobase | + | edge annaffy GO {} |
− | timecourse methods | + | edge annaffy KEGG {} |
− | + | edge spotSegmentation mclust {} | |
− | + | edge geneRecommender Biobase {} | |
− | nem e1071 | + | edge codelink methods {} |
− | nem graph | + | edge codelink limma {} |
− | nem Rgraphviz | + | edge codelink annotate {} |
− | nem RBGL | + | edge widgetTools methods {} |
− | HEM | + | edge widgetTools utils {} |
− | + | edge splots grid {} | |
− | SBMLR XML | + | edge RSNPper methods {} |
− | SBMLR odesolve | + | edge RSNPper utils {} |
− | + | edge RSNPper tools {} | |
− | MLInterfaces Biobase | + | edge RSNPper XML {} |
− | MLInterfaces methods | + | edge GeneMeta methods {} |
− | MLInterfaces genefilter | + | edge GeneMeta Biobase {} |
− | + | edge GeneMeta genefilter {} | |
− | weaver digest | + | edge GEOquery methods {} |
− | weaver tools | + | edge globaltest methods {} |
− | weaver utils | + | edge globaltest graphics {} |
− | weaver codetools | + | edge globaltest multtest {} |
− | goTools Biobase | + | edge pathRender graph {} |
− | goTools annotate | + | edge pathRender Rgraphviz {} |
− | goTools GO | + | edge pathRender cMAP {} |
− | + | edge convert Biobase {} | |
− | applera Biobase | + | edge convert limma {} |
− | applera methods | + | edge convert marray {} |
− | applera affy | + | edge convert utils {} |
− | applera genefilter | + | edge convert methods {} |
− | applera limma | + | edge stam GO {} |
− | applera geneplotter | + | edge stam Biobase {} |
− | applera RColorBrewer | + | edge stam pamr {} |
− | applera prada | + | edge stam cluster {} |
− | applera combinat | + | edge stam annaffy {} |
− | + | edge stam methods {} | |
− | annaffy methods | + | edge BSgenome methods {} |
− | annaffy Biobase | + | edge BSgenome Biostrings {} |
− | annaffy GO | + | edge pdmclass Biobase {} |
− | annaffy KEGG | + | edge pdmclass fibroEset {} |
− | + | edge pdmclass mda {} | |
− | spotSegmentation mclust | + | edge cellHTS prada {} |
− | + | edge cellHTS RColorBrewer {} | |
− | geneRecommender Biobase | + | edge cellHTS Biobase {} |
− | + | edge cellHTS genefilter {} | |
− | codelink methods | + | edge metaArray MergeMaid {} |
− | codelink limma | + | edge EBImage methods {} |
− | codelink annotate | + | edge arrayQCplot RGtk2 {} |
− | + | edge arrayQCplot cairoDevice {} | |
− | widgetTools methods | + | edge arrayQCplot LPE {} |
− | widgetTools utils | + | edge hopach cluster {} |
− | + | edge hopach Biobase {} | |
− | splots grid | + | edge DNAcopy NONE {} |
− | RSNPper methods | + | edge ssize gdata {} |
− | RSNPper utils | + | edge ssize xtable {} |
− | RSNPper tools | + | edge apComplex graph {} |
− | RSNPper XML | + | edge tilingArray methods {} |
− | + | edge tilingArray Biobase {} | |
− | GeneMeta methods | + | edge tilingArray affy {} |
− | GeneMeta Biobase | + | edge tilingArray RColorBrewer {} |
− | GeneMeta genefilter | + | edge tilingArray grid {} |
− | GEOquery methods | + | edge tilingArray strucchange {} |
− | + | edge tilingArray vsn {} | |
− | globaltest methods | + | edge tilingArray genefilter {} |
− | globaltest graphics | + | edge tilingArray geneplotter {} |
− | globaltest multtest | + | edge tilingArray pixmap {} |
− | pathRender graph | + | edge RMAPPER methods {} |
− | pathRender Rgraphviz | + | edge splicegear methods {} |
− | pathRender cMAP | + | edge splicegear utils {} |
− | + | edge splicegear grid {} | |
− | convert Biobase | + | edge splicegear Biobase {} |
− | convert limma | + | edge splicegear XML {} |
− | convert marray | + | edge splicegear annotate {} |
− | convert utils | + | edge gff3Plotter methods {} |
− | convert methods | + | edge mmgmos methods {} |
− | + | edge mmgmos Biobase {} | |
− | + | edge mmgmos affy {} | |
− | stam GO | + | edge plgem Biobase {} |
− | stam Biobase | + | edge plgem MASS {} |
− | stam pamr | + | edge DEDS methods {} |
− | stam cluster | + | edge pgUtils Rdbi {} |
− | stam annaffy | + | edge pgUtils RdbiPgSQL {} |
− | stam methods | + | edge pgUtils methods {} |
− | BSgenome | + | edge hypergraph methods {} |
− | + | edge hypergraph graph {} | |
− | BSgenome Biostrings | + | edge arrayMagic methods {} |
− | pdmclass Biobase | + | edge arrayMagic utils {} |
− | + | edge arrayMagic Biobase {} | |
− | pdmclass fibroEset | + | edge arrayMagic vsn {} |
− | pdmclass mda | + | edge arrayMagic limma {} |
− | + | edge arrayMagic genefilter {} | |
− | cellHTS prada | + | edge nudge stats {} |
− | cellHTS RColorBrewer | + | edge sscore affy {} |
− | cellHTS Biobase | + | edge sscore affxparser {} |
− | cellHTS genefilter | + | edge simulatorAPMS graph {} |
− | metaArray MergeMaid | + | edge simulatorAPMS apComplex {} |
− | + | edge simulatorAPMS Rgraphviz {} | |
− | EBImage methods | + | edge simulatorAPMS ScISI {} |
− | arrayQCplot RGtk2 | + | edge simulatorAPMS ppiStats {} |
− | arrayQCplot cairoDevice | + | edge affy Biobase {} |
− | arrayQCplot LPE | + | edge affy methods {} |
− | + | edge affy utils {} | |
− | hopach cluster | + | edge affy affyio {} |
− | hopach Biobase | + | edge OCplus akima {} |
− | DNAcopy NONE | + | edge OCplus multtest {} |
− | ssize gdata | + | edge diffGeneAnalysis minpack.lm {} |
− | ssize xtable | + | edge macat Biobase {} |
− | apComplex graph | + | edge macat annotate {} |
− | + | edge idiogram methods {} | |
− | tilingArray methods | + | edge idiogram Biobase {} |
− | tilingArray Biobase | + | edge idiogram annotate {} |
− | tilingArray affy | + | edge pcot2 grDevices {} |
− | tilingArray RColorBrewer | + | edge pcot2 Biobase {} |
− | tilingArray grid | + | edge pcot2 amap {} |
− | tilingArray strucchange | + | edge iSNetwork methods {} |
− | tilingArray vsn | + | edge iSNetwork graph {} |
− | tilingArray genefilter | + | edge iSNetwork Rgraphviz {} |
− | tilingArray geneplotter | + | edge iSNetwork RGtk {} |
− | tilingArray pixmap | + | edge iSNetwork gtkDevice {} |
− | RMAPPER methods | + | edge iSNetwork BioMVCClass {} |
− | + | edge iSNetwork MVCClass {} | |
− | splicegear methods | + | edge iSNetwork Biobase {} |
− | splicegear utils | + | edge iSNetwork annotate {} |
− | splicegear grid | + | edge affyPLM affy {} |
− | splicegear Biobase | + | edge affyPLM affydata {} |
− | splicegear XML | + | edge affyPLM Biobase {} |
− | splicegear annotate | + | edge affyPLM methods {} |
− | + | edge affyPLM gcrma {} | |
− | gff3Plotter methods | + | edge spikeLI utils {} |
− | + | edge genefilter methods {} | |
− | mmgmos methods | + | edge genefilter Biobase {} |
− | mmgmos Biobase | + | edge genefilter survival {} |
− | mmgmos affy | + | edge altcdfenvs methods {} |
− | + | edge altcdfenvs Biobase {} | |
− | plgem Biobase | + | edge altcdfenvs affy {} |
− | plgem MASS | + | edge altcdfenvs matchprobes {} |
− | + | edge altcdfenvs makecdfenv {} | |
− | DEDS methods | + | edge OLIN methods {} |
− | + | edge OLIN stats {} | |
− | pgUtils Rdbi | + | edge OLIN locfit {} |
− | pgUtils RdbiPgSQL | + | edge OLIN Biobase {} |
− | pgUtils methods | + | edge OLIN marray {} |
− | + | edge beadarraySNP methods {} | |
− | hypergraph methods | + | edge beadarraySNP Biobase {} |
− | hypergraph graph | + | edge beadarraySNP limma {} |
− | + | edge beadarraySNP quantsmooth {} | |
− | arrayMagic methods | + | edge Heatplus NONE {} |
− | arrayMagic utils | + | edge GeneTS GeneCycle {} |
− | arrayMagic Biobase | + | edge GeneTS GeneNet {} |
− | arrayMagic vsn | + | edge safe methods {} |
− | arrayMagic limma | + | edge safe Biobase {} |
− | arrayMagic genefilter | + | edge Rgraphviz methods {} |
− | nudge stats | + | edge Rgraphviz graph {} |
− | + | edge Rgraphviz geneplotter {} | |
− | sscore affy | + | edge RdbiPgSQL Rdbi {} |
− | sscore affxparser | + | edge twilight splines {} |
− | simulatorAPMS graph | + | edge twilight stats {} |
− | simulatorAPMS apComplex | + | edge GeneTraffic Biobase {} |
− | simulatorAPMS Rgraphviz | + | edge GeneTraffic affy {} |
− | simulatorAPMS ScISI | + | edge GeneTraffic marray {} |
− | simulatorAPMS ppiStats | + | edge GeneTraffic SSOAP {} |
− | affy | + | edge GeneTraffic XML {} |
− | + | edge GeneTraffic digest {} | |
− | affy methods | + | edge GeneTraffic methods {} |
− | affy utils | + | edge simpleaffy affy {} |
− | affy affyio | + | edge simpleaffy genefilter {} |
− | + | edge maSigPro Biobase {} | |
− | OCplus akima | + | edge Icens survival {} |
− | OCplus multtest | + | edge Rredland methods {} |
− | diffGeneAnalysis minpack.lm | + | edge Rredland graph {} |
− | macat Biobase | + | edge graph methods {} |
− | macat annotate | + | edge nnNorm nnet {} |
− | + | edge nnNorm marray {} | |
− | idiogram methods | + | edge genArise locfit {} |
− | idiogram Biobase | + | edge genArise tkrplot {} |
− | idiogram annotate | + | edge genArise xtable {} |
− | + | edge genArise methods {} | |
− | pcot2 grDevices | + | edge EBarrays Biobase {} |
− | pcot2 Biobase | + | edge EBarrays methods {} |
− | pcot2 amap | + | edge EBarrays utils {} |
− | + | edge EBarrays lattice {} | |
− | iSNetwork methods | + | edge reb Biobase {} |
− | iSNetwork graph | + | edge reb idiogram {} |
− | iSNetwork Rgraphviz | + | edge SAGx stats {} |
− | iSNetwork RGtk | + | edge SAGx multtest {} |
− | iSNetwork gtkDevice | + | edge SAGx sma {} |
− | iSNetwork BioMVCClass | + | edge SAGx methods {} |
− | iSNetwork MVCClass | + | edge RMAGEML marray {} |
− | iSNetwork Biobase | + | edge RMAGEML limma {} |
− | iSNetwork annotate | + | edge RMAGEML Biobase {} |
− | + | edge affyio methods {} | |
− | affyPLM affy | + | edge edd methods {} |
− | affyPLM affydata | + | edge edd golubEsets {} |
− | affyPLM Biobase | + | edge edd Biobase {} |
− | affyPLM methods | + | edge edd class {} |
− | affyPLM gcrma | + | edge edd nnet {} |
− | spikeLI utils | + | edge edd xtable {} |
− | + | edge maDB Biobase {} | |
− | genefilter methods | + | edge maDB affy {} |
− | genefilter Biobase | + | edge maDB limma {} |
− | genefilter survival | + | edge maDB methods {} |
− | + | edge DynDoc methods {} | |
− | altcdfenvs methods | + | edge DynDoc tools {} |
− | altcdfenvs Biobase | + | edge BeadExplorer methods {} |
− | altcdfenvs affy | + | edge BeadExplorer widgetTools {} |
− | altcdfenvs matchprobes | + | edge BeadExplorer affy {} |
− | altcdfenvs makecdfenv | + | edge BeadExplorer R2HTML {} |
− | + | edge BeadExplorer grDevices {} | |
− | OLIN methods | + | edge BeadExplorer tkWidgets {} |
− | OLIN stats | + | edge affycoretools affy {} |
− | OLIN locfit | + | edge affycoretools limma {} |
− | OLIN Biobase | + | edge affycoretools GOstats {} |
− | OLIN marray | + | edge affycoretools biomaRt {} |
− | beadarraySNP methods | + | edge limmaGUI limma {} |
− | beadarraySNP Biobase | + | edge limmaGUI tcltk {} |
− | beadarraySNP limma | + | edge ABarray Biobase {} |
− | beadarraySNP quantsmooth | + | edge ABarray multtest {} |
− | Heatplus NONE | + | edge GGtools methods {} |
− | + | edge GGtools Biobase {} | |
− | GeneTS GeneCycle | + | edge GGtools hgfocus {} |
− | GeneTS GeneNet | + | edge GGtools geneplotter {} |
− | + | edge Biobase tools {} | |
− | safe methods | + | edge Biobase methods {} |
− | safe Biobase | + | edge Biobase utils {} |
− | + | edge factDesign Biobase {} | |
− | Rgraphviz methods | + | edge factDesign affy {} |
− | Rgraphviz graph | + | edge factDesign stats {} |
− | Rgraphviz geneplotter | + | edge sagenhaft SparseM {} |
− | + | edge ROC utils {} | |
− | RdbiPgSQL Rdbi | + | edge ROC methods {} |
− | + | edge bim stats {} | |
− | twilight splines | + | edge bim qtl {} |
− | twilight stats | + | edge gcrma Biobase {} |
− | + | edge gcrma affy {} | |
− | GeneTraffic Biobase | + | edge gcrma matchprobes {} |
− | GeneTraffic affy | + | edge gcrma splines {} |
− | GeneTraffic marray | + | edge adSplit methods {} |
− | GeneTraffic SSOAP | + | edge adSplit stats {} |
− | GeneTraffic XML | + | edge adSplit cluster {} |
− | GeneTraffic digest | + | edge adSplit multtest {} |
− | GeneTraffic methods | + | edge adSplit Biobase {} |
− | + | edge adSplit affy {} | |
− | simpleaffy affy | + | edge adSplit GO {} |
− | simpleaffy genefilter | + | edge adSplit KEGG {} |
− | + | edge Resourcerer AnnBuilder {} | |
− | maSigPro Biobase | + | edge MergeMaid survival {} |
− | Icens survival | + | edge MergeMaid Biobase {} |
− | Rredland methods | + | edge MergeMaid MASS {} |
− | Rredland graph | + | edge MergeMaid methods {} |
− | + | edge plier affy {} | |
− | graph methods | + | edge quantsmooth quantreg {} |
− | + | edge quantsmooth lodplot {} | |
− | nnNorm nnet | + | edge affycomp Biobase {} |
− | nnNorm marray | + | edge stepNorm marray {} |
− | + | edge stepNorm MASS {} | |
− | genArise locfit | + | edge stepNorm methods {} |
− | genArise tkrplot | + | edge clusterStab Biobase {} |
− | genArise xtable | + | edge clusterStab methods {} |
− | genArise methods | + | edge affyQCReport Biobase {} |
− | + | edge affyQCReport affy {} | |
− | EBarrays Biobase | + | edge affyQCReport simpleaffy {} |
− | EBarrays methods | + | edge affypdnn affy {} |
− | EBarrays utils | + | edge affypdnn affydata {} |
− | EBarrays lattice | + | edge affypdnn hgu95av2probe {} |
− | + | edge affydata affy {} | |
− | reb Biobase | + | edge pairseqsim methods {} |
− | reb idiogram | + | edge pairseqsim stats {} |
− | + | edge fdrame NONE {} | |
− | SAGx stats | + | edge ScISI methods {} |
− | SAGx multtest | + | edge ScISI apComplex {} |
− | SAGx sma | + | edge ScISI GO {} |
− | SAGx methods | + | edge ScISI GOstats {} |
− | + | edge ScISI graph {} | |
− | RMAGEML marray | + | edge ScISI RBGL {} |
− | RMAGEML limma | + | edge ScISI Rgraphviz {} |
− | RMAGEML Biobase | + | edge ScISI YEAST {} |
− | affyio methods | + | edge ScISI xtable {} |
− | edd methods | + | edge multtest methods {} |
− | edd golubEsets | + | edge multtest Biobase {} |
− | edd Biobase | + | edge multtest survival {} |
− | edd class | + | edge ctc NONE {} |
− | edd nnet | + | edge yeastExpData graph {} |
− | edd xtable | + | edge golubEsets Biobase {} |
− | + | edge estrogen affy {} | |
− | maDB Biobase | + | edge MAQCsubset Biobase {} |
− | maDB affy | + | edge fibroEset Biobase {} |
− | maDB limma | + | edge HEEBOdata NONE {} |
− | maDB methods | + | edge facsDorit prada {} |
− | DynDoc methods | + | edge Iyer517 Biobase {} |
− | DynDoc tools | + | edge stjudem utils {} |
− | + | edge ProData Biobase {} | |
− | BeadExplorer methods | + | edge SpikeIn affy {} |
− | BeadExplorer widgetTools | + | edge ALL Biobase {} |
− | BeadExplorer affy | + | edge AmpAffyExample affy {} |
− | BeadExplorer R2HTML | + | edge kidpack Biobase {} |
− | BeadExplorer grDevices | + | edge CLL affy {} |
− | BeadExplorer tkWidgets | + | edge CLL Biobase {} |
− | affycoretools affy | + | edge SpikeInSubset Biobase {} |
− | affycoretools limma | + | edge SpikeInSubset affy {} |
− | affycoretools GOstats | + | edge gaschYHS Biobase {} |
− | affycoretools biomaRt | + | edge ALLMLL affy {} |
− | limmaGUI limma | + | edge bronchialIL13 affy {} |
− | limmaGUI tcltk | + | edge beta7 marray {} |
− | ABarray Biobase | + | edge lungExpression Biobase {} |
− | ABarray multtest | + | edge HIVcDNAvantWout03 NONE {} |
− | + | edge yeastCC Biobase {} | |
− | GGtools methods | + | edge harbChIP Biobase {} |
− | GGtools Biobase | + | edge ppiData Rgraphviz {} |
− | GGtools hgfocus | + | edge ppiData graph {} |
− | GGtools geneplotter | + | edge colonCA Biobase {} |
− | + | edge SNAData graph {} | |
− | Biobase tools | + | edge ecoliLeucine affy {} |
− | Biobase methods | + | edge davidTiling Biobase {} |
− | Biobase utils | + | edge davidTiling tilingArray {} |
− | factDesign Biobase | + | edge davidTiling GO {} |
− | factDesign affy | + | edge MEEBOdata NONE {} |
− | factDesign stats | + | edge GGdata Biobase {} |
− | + | edge GGdata hgfocus {} | |
− | sagenhaft SparseM | + | edge rn230rnentrezgprobe matchprobes {} |
− | + | edge rn230brnrefseqprobe matchprobes {} | |
− | ROC utils | + | edge dmgenome1dmense utils {} |
− | ROC methods | + | edge medicagoprobe matchprobes {} |
− | bim stats | + | edge dmgenome1dmugcdf utils {} |
− | bim qtl | + | edge hsex10stv2ptentrezg utils {} |
− | gcrma | + | edge caninecdf utils {} |
− | + | edge mm430ammensgcdf utils {} | |
− | gcrma affy | + | edge mm430ammrefseqcdf utils {} |
− | gcrma matchprobes | + | edge hsfocushsenstprobe matchprobes {} |
− | gcrma splines | + | edge hs133bhsentrezgprobe matchprobes {} |
− | + | edge drzebrafishdrugcdf utils {} | |
− | adSplit methods | + | edge mm430ammentrezg utils {} |
− | adSplit stats | + | edge hgu133bprobe matchprobes {} |
− | adSplit cluster | + | edge mmex10stv1mmentrezgprobe matchprobes {} |
− | adSplit multtest | + | edge rn34arnenseprobe matchprobes {} |
− | adSplit Biobase | + | edge soybeancdf utils {} |
− | adSplit affy | + | edge hs133xptensgprobe matchprobes {} |
− | adSplit GO | + | edge rtu34probe matchprobes {} |
− | adSplit KEGG | + | edge hsex10stv2hsensgcdf utils {} |
− | + | edge rnex10stv1rnensecdf utils {} | |
− | Resourcerer AnnBuilder | + | edge mm11ksubbmmentrezgcdf utils {} |
− | + | edge mu6500subdcdf utils {} | |
− | + | edge mm74av2mmensgcdf utils {} | |
− | MergeMaid survival | + | edge mm74bv2mmentrezgcdf utils {} |
− | MergeMaid Biobase | + | edge rn230rnenstprobe matchprobes {} |
− | MergeMaid MASS | + | edge hs95av2hsrefseq utils {} |
− | MergeMaid methods | + | edge hsex10stv2hsentrezg utils {} |
− | + | edge mm430bmmenstprobe matchprobes {} | |
− | plier affy | + | edge hsex10stv2hsense utils {} |
− | quantsmooth quantreg | + | edge mm74av2mmentrezg utils {} |
− | quantsmooth lodplot | + | edge BSgenome.Dmelanogaster.BDGP.Release5 methods {} |
− | + | edge BSgenome.Dmelanogaster.BDGP.Release5 Biostrings {} | |
− | affycomp Biobase | + | edge BSgenome.Dmelanogaster.BDGP.Release5 BSgenome {} |
− | + | edge dmgenome1dmensg utils {} | |
− | stepNorm marray | + | edge mm430bmmensecdf utils {} |
− | stepNorm MASS | + | edge mm430mmensgcdf utils {} |
− | stepNorm methods | + | edge hu35ksubaprobe matchprobes {} |
− | clusterStab Biobase | + | edge rn230brnensgprobe matchprobes {} |
− | + | edge hsex10stv2ptense utils {} | |
− | clusterStab methods | + | edge osriceostigrprobe matchprobes {} |
− | + | edge hsex10stv2hsentrezgprobe matchprobes {} | |
− | affyQCReport Biobase | + | edge cfcanine2cfenstprobe matchprobes {} |
− | affyQCReport affy | + | edge mm430mmentrezg utils {} |
− | affyQCReport simpleaffy | + | edge mm74av1mmrefseqprobe matchprobes {} |
− | + | edge rnex10stv1rnrefseq utils {} | |
− | affypdnn affy | + | edge atgenomeattaircdf utils {} |
− | affypdnn affydata | + | edge hs133xptensgcdf utils {} |
− | affypdnn hgu95av2probe | + | edge mu19ksubccdf utils {} |
− | + | edge hgu95ecdf utils {} | |
− | affydata affy | + | edge atgenomeatrefseqcdf utils {} |
− | pairseqsim methods | + | edge hs133phsrefseqprobe matchprobes {} |
− | pairseqsim stats | + | edge hsex10stv2hsensg utils {} |
− | fdrame NONE | + | edge hs133xptentrezg utils {} |
− | ScISI methods | + | edge saureusprobe matchprobes {} |
− | ScISI apComplex | + | edge hs133av2hsenseprobe matchprobes {} |
− | ScISI GO | + | edge rhesusprobe matchprobes {} |
− | ScISI GOstats | + | edge mm74av2mmense utils {} |
− | ScISI graph | + | edge mm11ksubammenstcdf utils {} |
− | ScISI RBGL | + | edge mmex10stv1mmrefseq utils {} |
− | ScISI Rgraphviz | + | edge cfcanine2cfentrezgcdf utils {} |
− | ScISI YEAST | + | edge ggchickenggenstprobe matchprobes {} |
− | ScISI xtable | + | edge cyp450cdf utils {} |
− | + | edge hsex10stv2ptensg utils {} | |
− | multtest methods | + | edge hs133pptenseprobe matchprobes {} |
− | multtest Biobase | + | edge hs133xhsensgcdf utils {} |
− | multtest survival | + | edge poplarcdf utils {} |
− | ctc NONE | + | edge dmdrosophila2dmrefseqprobe matchprobes {} |
− | + | edge hs95av2hsrefseqprobe matchprobes {} | |
− | yeastExpData graph | + | edge hs133xhsentrezg utils {} |
− | golubEsets Biobase | + | edge mm11ksubammugcdf utils {} |
− | + | edge mm74av2mmensg utils {} | |
− | estrogen affy | + | edge hsex10stv2hsenstprobe matchprobes {} |
− | MAQCsubset Biobase | + | edge mgu74cprobe matchprobes {} |
− | fibroEset Biobase | + | edge hsfocushsenseprobe matchprobes {} |
− | HEEBOdata NONE | + | edge hs133bhsentrezgcdf utils {} |
− | facsDorit | + | edge mmex10stv1mmense utils {} |
− | + | edge mm11ksubammenstprobe matchprobes {} | |
− | Iyer517 Biobase | + | edge hs133av2ptensgprobe matchprobes {} |
− | + | edge drzebrafishdrense utils {} | |
− | stjudem utils | + | edge mm430mmrefseqcdf utils {} |
− | + | edge cfcanine2cfenstcdf utils {} | |
− | ProData Biobase | + | edge hs133aptenstcdf utils {} |
− | + | edge rn230rnenseprobe matchprobes {} | |
− | SpikeIn affy | + | edge mm430bmmenseprobe matchprobes {} |
− | ALL Biobase | + | edge mm74av1mmug utils {} |
− | + | edge bovinecdf utils {} | |
− | + | edge drzebrafishdrensecdf utils {} | |
− | AmpAffyExample affy | + | edge dmgenome1dmensecdf utils {} |
− | + | edge rae230bcdf utils {} | |
− | + | edge hu6800cdf utils {} | |
− | + | edge ath1attairprobe matchprobes {} | |
− | kidpack Biobase | + | edge canineprobe matchprobes {} |
− | + | edge mmex10stv1mmensg utils {} | |
− | CLL affy | + | edge hs133ahsrefseqcdf utils {} |
− | CLL Biobase | + | edge cfcanine2cfenseprobe matchprobes {} |
− | + | edge rnex10stv1rnugcdf utils {} | |
− | SpikeInSubset Biobase | + | edge mm74av2mmrefseq utils {} |
− | SpikeInSubset affy | + | edge hs133ahsenstcdf utils {} |
− | gaschYHS Biobase | + | edge mm430mmrefseq utils {} |
− | + | edge drzebrafishdrensg utils {} | |
− | ALLMLL affy | + | edge ggchickenggenstcdf utils {} |
− | bronchialIL13 affy | + | edge mm74cv2mmenstcdf utils {} |
− | + | edge hsfocusptensgprobe matchprobes {} | |
− | beta7 marray | + | edge BSgenome.Dmelanogaster.UCSC.dm2 methods {} |
− | + | edge BSgenome.Dmelanogaster.UCSC.dm2 Biostrings {} | |
− | lungExpression Biobase | + | edge BSgenome.Dmelanogaster.UCSC.dm2 BSgenome {} |
− | HIVcDNAvantWout03 NONE | + | edge hs133bhsenstprobe matchprobes {} |
− | yeastCC Biobase | + | edge mm11ksubammugprobe matchprobes {} |
− | harbChIP Biobase | + | edge ggchickenggenseprobe matchprobes {} |
− | ppiData Rgraphviz | + | edge mm430mmense utils {} |
− | ppiData graph | + | edge mm74cv2mmenstprobe matchprobes {} |
− | + | edge dmdrosophila2dmenst utils {} | |
− | colonCA Biobase | + | edge tomatocdf utils {} |
− | + | edge mm74av1mmenst utils {} | |
− | SNAData graph | + | edge mgu74bv2probe matchprobes {} |
− | + | edge rn230arnenstcdf utils {} | |
− | ecoliLeucine affy | + | edge hgu133acdf utils {} |
− | + | edge BSgenome.Hsapiens.UCSC.hg16 methods {} | |
− | davidTiling Biobase | + | edge BSgenome.Hsapiens.UCSC.hg16 Biostrings {} |
− | davidTiling tilingArray | + | edge BSgenome.Hsapiens.UCSC.hg16 BSgenome {} |
− | davidTiling GO | + | edge hs95av2hsenstprobe matchprobes {} |
− | MEEBOdata NONE | + | edge atgenomeattigrprobe matchprobes {} |
− | + | edge cfcanine2cfense utils {} | |
− | GGdata Biobase | + | edge rnex10stv1rnensgcdf utils {} |
− | GGdata hgfocus | + | edge mm74cv2mmentrezgcdf utils {} |
− | + | edge hs133ahsense utils {} | |
− | rn230rnentrezgprobe matchprobes | + | edge dmdrosophila2dmenstprobe matchprobes {} |
− | + | edge hsex10stv2hsenseprobe matchprobes {} | |
− | rn230brnrefseqprobe matchprobes | + | edge hsfocusptentrezgprobe matchprobes {} |
− | dmgenome1dmense utils | + | edge rnex10stv1rnentrezg utils {} |
− | + | edge BSgenome.Hsapiens.UCSC.hg17 methods {} | |
− | medicagoprobe matchprobes | + | edge BSgenome.Hsapiens.UCSC.hg17 Biostrings {} |
− | dmgenome1dmugcdf utils | + | edge BSgenome.Hsapiens.UCSC.hg17 BSgenome {} |
− | hsex10stv2ptentrezg utils | + | edge moe430bcdf utils {} |
− | caninecdf utils | + | edge rnex10stv1rnensgprobe matchprobes {} |
− | mm430ammensgcdf utils | + | edge mm430mmentrezgprobe matchprobes {} |
− | mm430ammrefseqcdf utils | + | edge ye6100subacdf utils {} |
− | + | edge mm430mmensg utils {} | |
− | hsfocushsenstprobe matchprobes | + | edge hs133xhsug utils {} |
− | + | edge mm11ksubammenseprobe matchprobes {} | |
− | + | edge chickencdf utils {} | |
− | hs133bhsentrezgprobe matchprobes | + | edge mm430bmmensgcdf utils {} |
− | drzebrafishdrugcdf utils | + | edge hs133aptense utils {} |
− | mm430ammentrezg utils | + | edge rn230rnenstcdf utils {} |
− | + | edge rn230arnenstprobe matchprobes {} | |
− | hgu133bprobe matchprobes | + | edge cfcanine2cfrefseq utils {} |
− | + | edge mm430bmmentrezg utils {} | |
− | mmex10stv1mmentrezgprobe matchprobes | + | edge BSgenome.Scerevisiae.UCSC.sacCer1 methods {} |
− | + | edge BSgenome.Scerevisiae.UCSC.sacCer1 Biostrings {} | |
− | rn34arnenseprobe matchprobes | + | edge BSgenome.Scerevisiae.UCSC.sacCer1 BSgenome {} |
− | soybeancdf utils | + | edge cfcanine2cfugprobe matchprobes {} |
− | + | edge BSgenome.Hsapiens.UCSC.hg18 methods {} | |
− | hs133xptensgprobe matchprobes | + | edge BSgenome.Hsapiens.UCSC.hg18 Biostrings {} |
− | + | edge BSgenome.Hsapiens.UCSC.hg18 BSgenome {} | |
− | + | edge hs133phsug utils {} | |
− | rtu34probe matchprobes | + | edge zebrafishcdf utils {} |
− | hsex10stv2hsensgcdf utils | + | edge rat2302cdf utils {} |
− | rnex10stv1rnensecdf utils | + | edge moe430bprobe matchprobes {} |
− | mm11ksubbmmentrezgcdf utils | + | edge rn230rnugcdf utils {} |
− | mu6500subdcdf utils | + | edge cfcanine2cfensg utils {} |
− | mm74av2mmensgcdf utils | + | edge hgu95bprobe matchprobes {} |
− | mm74bv2mmentrezgcdf utils | + | edge yeast2cdf utils {} |
− | + | edge hgu133plus2probe matchprobes {} | |
− | rn230rnenstprobe matchprobes | + | edge hs133ahsensg utils {} |
− | + | edge mm74av1mmrefseqcdf utils {} | |
− | hs95av2hsrefseq utils | + | edge mmex10stv1mmenstprobe matchprobes {} |
− | hsex10stv2hsentrezg utils | + | edge hsfocusptenstcdf utils {} |
− | + | edge mm74bv2mmensecdf utils {} | |
− | mm430bmmenstprobe matchprobes | + | edge rn230brnug utils {} |
− | hsex10stv2hsense utils | + | edge hs133xhsrefseqcdf utils {} |
− | mm74av2mmentrezg utils | + | edge hs133aptensg utils {} |
− | + | edge hgu133a2probe matchprobes {} | |
− | BSgenome.Dmelanogaster.BDGP.Release5 methods | + | edge citrusprobe matchprobes {} |
− | BSgenome.Dmelanogaster.BDGP.Release5 Biostrings | + | edge hs133ahsugprobe matchprobes {} |
− | BSgenome.Dmelanogaster.BDGP.Release5 BSgenome | + | edge hsex10stv2ptensgprobe matchprobes {} |
− | dmgenome1dmensg utils | + | edge ggchickenggugprobe matchprobes {} |
− | + | edge mm74cv2mmugprobe matchprobes {} | |
− | mm430bmmensecdf utils | + | edge dmgenome1dmenst utils {} |
− | + | edge rn34arnentrezgprobe matchprobes {} | |
− | mm430mmensgcdf utils | + | edge mm74av2mmenstprobe matchprobes {} |
− | + | edge BSgenome.Celegans.UCSC.ce2 methods {} | |
− | hu35ksubaprobe matchprobes | + | edge BSgenome.Celegans.UCSC.ce2 Biostrings {} |
− | + | edge BSgenome.Celegans.UCSC.ce2 BSgenome {} | |
− | rn230brnensgprobe matchprobes | + | edge mmex10stv1mmensecdf utils {} |
− | hsex10stv2ptense utils | + | edge hs133bhsenseprobe matchprobes {} |
− | + | edge hsfocushsenstcdf utils {} | |
− | osriceostigrprobe matchprobes | + | edge mm74cv2mmentrezgprobe matchprobes {} |
− | + | edge mm11ksubbmmenstcdf utils {} | |
− | hsex10stv2hsentrezgprobe matchprobes | + | edge mm74cv2mmenseprobe matchprobes {} |
− | + | edge hs133xhsense utils {} | |
− | cfcanine2cfenstprobe matchprobes | + | edge dmdrosophila2dmug utils {} |
− | mm430mmentrezg utils | + | edge mm74bv2mmensgprobe matchprobes {} |
− | + | edge rgu34cprobe matchprobes {} | |
− | mm74av1mmrefseqprobe matchprobes | + | edge rn230arnugprobe matchprobes {} |
− | rnex10stv1rnrefseq utils | + | edge hs133xptense utils {} |
− | atgenomeattaircdf utils | + | edge hsex10stv2hsenst utils {} |
− | + | edge hs95av2hsenseprobe matchprobes {} | |
− | + | edge mgu74bv2cdf utils {} | |
− | hs133xptensgcdf utils | + | edge rn34arnrefseqcdf utils {} |
− | mu19ksubccdf utils | + | edge hsex10stv2ptenst utils {} |
− | hgu95ecdf utils | + | edge dmdrosophila2dmenseprobe matchprobes {} |
− | atgenomeatrefseqcdf utils | + | edge hthgu133acdf utils {} |
− | + | edge agprobe matchprobes {} | |
− | hs133phsrefseqprobe matchprobes | + | edge hsfocushsentrezgprobe matchprobes {} |
− | hsex10stv2hsensg utils | + | edge hs133xhsensg utils {} |
− | hs133xptentrezg utils | + | edge drzebrafishdrensgcdf utils {} |
− | + | edge dmgenome1dmensgcdf utils {} | |
− | saureusprobe matchprobes | + | edge hu35ksubdprobe matchprobes {} |
− | + | edge hs133bptensgprobe matchprobes {} | |
− | hs133av2hsenseprobe matchprobes | + | edge rn230rnugprobe matchprobes {} |
− | + | edge maizeprobe matchprobes {} | |
− | rhesusprobe matchprobes | + | edge rn230arnenseprobe matchprobes {} |
− | mm74av2mmense utils | + | edge drzebrafishdrentrezg utils {} |
− | mm11ksubammenstcdf utils | + | edge hs133xptensg utils {} |
− | + | edge hs133pptenstcdf utils {} | |
− | + | edge mm74av2mmenst utils {} | |
− | mmex10stv1mmrefseq utils | + | edge vvgrapevvtigrprobe matchprobes {} |
− | cfcanine2cfentrezgcdf utils | + | edge hsex10stv2hsugcdf utils {} |
− | + | edge hs133bptenstcdf utils {} | |
− | ggchickenggenstprobe matchprobes | + | edge paeg1acdf utils {} |
− | cyp450cdf utils | + | edge mm11ksubammug utils {} |
− | hsex10stv2ptensg utils | + | edge mm430ammugcdf utils {} |
− | + | edge ggchickenggrefseq utils {} | |
− | hs133pptenseprobe matchprobes | + | edge hs95av2ptensgprobe matchprobes {} |
− | hs133xhsensgcdf utils | + | edge hs133av2hsrefseqcdf utils {} |
− | poplarcdf utils | + | edge mmex10stv1mmenseprobe matchprobes {} |
− | + | edge mm430ammensgprobe matchprobes {} | |
− | dmdrosophila2dmrefseqprobe matchprobes | + | edge hs133ahsrefseqprobe matchprobes {} |
− | + | edge hs133bhsense utils {} | |
− | hs95av2hsrefseqprobe matchprobes | + | edge hs133phsenstcdf utils {} |
− | hs133xhsentrezg utils | + | edge hs133bptentrezgcdf utils {} |
− | + | edge hgu133aprobe matchprobes {} | |
− | mm11ksubammugcdf utils | + | edge hs133bhsenstcdf utils {} |
− | mm74av2mmensg utils | + | edge dmdrosophila2dmrefseq utils {} |
− | + | edge hs133bptense utils {} | |
− | + | edge mm74av2mmenseprobe matchprobes {} | |
− | hsex10stv2hsenstprobe matchprobes | + | edge mm11ksubammense utils {} |
− | + | edge hu35ksubbcdf utils {} | |
− | mgu74cprobe matchprobes | + | edge mmex10stv1mmenst utils {} |
− | + | edge dmdrosophila2dmenstcdf utils {} | |
− | + | edge hsfocushsugprobe matchprobes {} | |
− | hsfocushsenseprobe matchprobes | + | edge atgenomeattigr utils {} |
− | + | edge hgu133atagcdf utils {} | |
− | hs133bhsentrezgcdf utils | + | edge mm11ksubbmmugprobe matchprobes {} |
− | mmex10stv1mmense utils | + | edge drzebrafishdrenst utils {} |
− | + | edge hgu133a2cdf utils {} | |
− | mm11ksubammenstprobe matchprobes | + | edge drzebrafishdrenstprobe matchprobes {} |
− | + | edge hs133phsentrezgcdf utils {} | |
− | hs133av2ptensgprobe matchprobes | + | edge hs95av2hsugcdf utils {} |
− | + | edge hs133bhsensg utils {} | |
− | + | edge hs95av2hsentrezgcdf utils {} | |
− | mm430mmrefseqcdf utils | + | edge ye6100subccdf utils {} |
− | cfcanine2cfenstcdf utils | + | edge rn34arnrefseqprobe matchprobes {} |
− | hs133aptenstcdf utils | + | edge hsfocushsrefseqcdf utils {} |
− | + | edge hsex10stv2hsug utils {} | |
− | rn230rnenseprobe matchprobes | + | edge rn230brnenstcdf utils {} |
− | + | edge hs133phsense utils {} | |
− | mm430bmmenseprobe matchprobes | + | edge hs133bptensg utils {} |
− | mm74av1mmug utils | + | edge mm11ksubammensg utils {} |
− | bovinecdf utils | + | edge rn230rnrefseqcdf utils {} |
− | drzebrafishdrensecdf utils | + | edge mu6500subacdf utils {} |
− | dmgenome1dmensecdf utils | + | edge hs133pptense utils {} |
− | rae230bcdf utils | + | edge tomatoprobe matchprobes {} |
− | hu6800cdf utils | + | edge rgu34acdf utils {} |
− | + | edge mm430bmmrefseqcdf utils {} | |
− | ath1attairprobe matchprobes | + | edge osriceosrefseqprobe matchprobes {} |
− | + | edge dmdrosophila2dmugcdf utils {} | |
− | canineprobe matchprobes | + | edge bovineprobe matchprobes {} |
− | mmex10stv1mmensg utils | + | edge hgu95av2cdf utils {} |
− | hs133ahsrefseqcdf utils | + | edge mm74bv2mmensgcdf utils {} |
− | + | edge mm11ksubbmmugcdf utils {} | |
− | cfcanine2cfenseprobe matchprobes | + | edge mgu74bcdf utils {} |
− | rnex10stv1rnugcdf utils | + | edge mm74av1mmugcdf utils {} |
− | mm74av2mmrefseq utils | + | edge cfcanine2cfrefseqcdf utils {} |
− | hs133ahsenstcdf utils | + | edge hu6800subbcdf utils {} |
− | mm430mmrefseq utils | + | edge hs133phsensg utils {} |
− | drzebrafishdrensg utils | + | edge rn34arnenstcdf utils {} |
− | ggchickenggenstcdf utils | + | edge mm74bv2mmentrezg utils {} |
− | mm74cv2mmenstcdf utils | + | edge mm74av1mmentrezgprobe matchprobes {} |
− | + | edge mm430mmenst utils {} | |
− | + | edge hsfocushsugcdf utils {} | |
− | hsfocusptensgprobe matchprobes | + | edge test3probe matchprobes {} |
− | + | edge soybeanprobe matchprobes {} | |
− | + | edge mmex10stv1mmensgcdf utils {} | |
− | BSgenome.Dmelanogaster.UCSC.dm2 methods | + | edge hs133pptensg utils {} |
− | BSgenome.Dmelanogaster.UCSC.dm2 Biostrings | + | edge mm74av1mmenstcdf utils {} |
− | BSgenome.Dmelanogaster.UCSC.dm2 BSgenome | + | edge dmgenome1dmenstprobe matchprobes {} |
− | + | edge hgu95bcdf utils {} | |
− | + | edge mgu74bprobe matchprobes {} | |
− | hs133bhsenstprobe matchprobes | + | edge mmex10stv1mmentrezg utils {} |
− | + | edge hs133xhsugcdf utils {} | |
− | mm11ksubammugprobe matchprobes | + | edge hs133phsugprobe matchprobes {} |
− | + | edge ggchickenggrefseqcdf utils {} | |
− | ggchickenggenseprobe matchprobes | + | edge cfcanine2cfenst utils {} |
− | mm430mmense utils | + | edge mm430ammrefseqprobe matchprobes {} |
− | mm74cv2mmenstprobe | + | edge mm74av2mmug utils {} |
− | + | edge mm430mmensgprobe matchprobes {} | |
− | dmdrosophila2dmenst utils | + | edge hs133phsugcdf utils {} |
− | tomatocdf utils | + | edge hs133bhsugprobe matchprobes {} |
− | mm74av1mmenst utils | + | edge hs133ahsenst utils {} |
− | + | edge rnex10stv1rnentrezgcdf utils {} | |
− | mgu74bv2probe matchprobes | + | edge hs133ahsug utils {} |
− | rn230arnenstcdf utils | + | edge dmdrosophila2dmugprobe matchprobes {} |
− | hgu133acdf utils | + | edge mm11ksubbmmrefseq utils {} |
− | + | edge hs133aptenst utils {} | |
− | BSgenome.Hsapiens.UCSC.hg16 methods | + | edge hs133av2hsentrezgcdf utils {} |
− | BSgenome.Hsapiens.UCSC.hg16 Biostrings | + | edge test1cdf utils {} |
− | BSgenome.Hsapiens.UCSC.hg16 BSgenome | + | edge rn230arnugcdf utils {} |
− | + | edge maizecdf utils {} | |
− | hs95av2hsenstprobe matchprobes | + | edge plasmodiumanophelesprobe matchprobes {} |
− | + | edge drzebrafishdrenseprobe matchprobes {} | |
− | + | edge hs133ahsensgprobe matchprobes {} | |
− | atgenomeattigrprobe matchprobes | + | edge hsex10stv2hsrefseqcdf utils {} |
− | cfcanine2cfense utils | + | edge rn34arnrefseq utils {} |
− | rnex10stv1rnensgcdf utils | + | edge mm74av1mmrefseq utils {} |
− | mm74cv2mmentrezgcdf utils | + | edge gp53cdf utils {} |
− | hs133ahsense utils | + | edge mm11ksubammrefseqcdf utils {} |
− | + | edge ecoliasv2probe matchprobes {} | |
− | + | edge rn230brnugprobe matchprobes {} | |
− | dmdrosophila2dmenstprobe matchprobes | + | edge hs133aptenstprobe matchprobes {} |
− | + | edge atgenomeattairprobe matchprobes {} | |
− | hsex10stv2hsenseprobe matchprobes | + | edge hs133av2ptenstcdf utils {} |
− | + | edge mgu74cv2probe matchprobes {} | |
− | hsfocusptentrezgprobe matchprobes | + | edge hs95av2hsense utils {} |
− | rnex10stv1rnentrezg utils | + | edge ggchickenggug utils {} |
− | + | edge hgu95eprobe matchprobes {} | |
− | BSgenome.Hsapiens.UCSC.hg17 methods | + | edge hs133pptentrezgprobe matchprobes {} |
− | BSgenome.Hsapiens.UCSC.hg17 Biostrings | + | edge canine2probe matchprobes {} |
− | BSgenome.Hsapiens.UCSC.hg17 BSgenome | + | edge mm11ksubbmmense utils {} |
− | moe430bcdf utils | + | edge hsfocushsense utils {} |
− | rnex10stv1rnensgprobe | + | edge mm11ksubbmmenstprobe matchprobes {} |
− | + | edge rn230arnense utils {} | |
− | + | edge hs95av2ptense utils {} | |
− | mm430mmentrezgprobe matchprobes | + | edge ath1attigr utils {} |
− | ye6100subacdf utils | + | edge yeast2probe matchprobes {} |
− | mm430mmensg utils | + | edge mm430bmmrefseq utils {} |
− | hs133xhsug utils | + | edge hsfocusptense utils {} |
− | + | edge hs133av2hsenstcdf utils {} | |
− | mm11ksubammenseprobe matchprobes | + | edge agcdf utils {} |
− | chickencdf utils | + | edge rn34arnugprobe matchprobes {} |
− | mm430bmmensgcdf utils | + | edge hs133xhsenst utils {} |
− | hs133aptense utils | + | edge hs95av2hsensg utils {} |
− | rn230rnenstcdf utils | + | edge hu35ksubdcdf utils {} |
− | + | edge mm74av1mmugprobe matchprobes {} | |
− | rn230arnenstprobe matchprobes | + | edge dmgenome1dmenseprobe matchprobes {} |
− | + | edge mm11ksubbmmensg utils {} | |
− | cfcanine2cfrefseq utils | + | edge hs133xptenst utils {} |
− | + | edge hsfocushsensg utils {} | |
− | mm430bmmentrezg utils | + | edge cfcanine2cfrefseqprobe matchprobes {} |
− | + | edge hs133phsenstprobe matchprobes {} | |
− | BSgenome.Scerevisiae.UCSC.sacCer1 methods | + | edge hs133bhsrefseqcdf utils {} |
− | BSgenome.Scerevisiae.UCSC.sacCer1 Biostrings | + | edge rn230arnensg utils {} |
− | BSgenome.Scerevisiae.UCSC.sacCer1 BSgenome | + | edge hs95av2ptensg utils {} |
− | + | edge mm430mmug utils {} | |
− | cfcanine2cfugprobe matchprobes | + | edge mm74cv2mmrefseqcdf utils {} |
− | + | edge ath1121501cdf utils {} | |
− | BSgenome.Hsapiens.UCSC.hg18 methods | + | edge hsfocusptensg utils {} |
− | BSgenome.Hsapiens.UCSC.hg18 Biostrings | + | edge ricecdf utils {} |
− | BSgenome.Hsapiens.UCSC.hg18 BSgenome | + | edge mm11ksubammensecdf utils {} |
− | hs133phsug utils | + | edge wheatprobe matchprobes {} |
− | zebrafishcdf utils | + | edge hs133av2hsugcdf utils {} |
− | rat2302cdf utils | + | edge drosophila2cdf utils {} |
− | + | edge moe430aprobe matchprobes {} | |
− | moe430bprobe matchprobes | + | edge hs95av2ptenstcdf utils {} |
− | rn230rnugcdf utils | + | edge hs95av2hsrefseqcdf utils {} |
− | cfcanine2cfensg utils | + | edge hgu95aprobe matchprobes {} |
− | + | edge atgenomeattigrcdf utils {} | |
− | hgu95bprobe matchprobes | + | edge barley1probe matchprobes {} |
− | yeast2cdf utils | + | edge mm74av1mmensgprobe matchprobes {} |
− | + | edge mu6500subccdf utils {} | |
− | hgu133plus2probe matchprobes | + | edge dmdrosophila2dmrefseqcdf utils {} |
− | hs133ahsensg utils | + | edge dmgenome1dmrefseqprobe matchprobes {} |
− | mm74av1mmrefseqcdf utils | + | edge rgu34ccdf utils {} |
− | + | edge hs133xhsensgprobe matchprobes {} | |
− | mmex10stv1mmenstprobe matchprobes | + | edge hsfocushsrefseq utils {} |
− | + | edge hcg110probe matchprobes {} | |
− | + | edge hs95av2hsenstcdf utils {} | |
− | hsfocusptenstcdf utils | + | edge mm430mmentrezgcdf utils {} |
− | + | edge hs133bhsrefseq utils {} | |
− | mm74bv2mmensecdf utils | + | edge hs133aptenseprobe matchprobes {} |
− | rn230brnug utils | + | edge rn230rnrefseqprobe matchprobes {} |
− | hs133xhsrefseqcdf utils | + | edge hs133xptenstprobe matchprobes {} |
− | hs133aptensg utils | + | edge BSgenome.Mmusculus.UCSC.mm7 methods {} |
− | + | edge BSgenome.Mmusculus.UCSC.mm7 Biostrings {} | |
− | hgu133a2probe matchprobes | + | edge BSgenome.Mmusculus.UCSC.mm7 BSgenome {} |
− | + | edge mu11ksubbprobe matchprobes {} | |
− | citrusprobe matchprobes | + | edge rn230arnrefseqcdf utils {} |
− | + | edge osriceosrefseq utils {} | |
− | hs133ahsugprobe matchprobes | + | edge hu6800subdcdf utils {} |
− | + | edge mm74bv2mmug utils {} | |
− | hsex10stv2ptensgprobe matchprobes | + | edge ecoliasv2cdf utils {} |
− | + | edge hs133bhsenst utils {} | |
− | ggchickenggugprobe matchprobes | + | edge mm74av2mmentrezgprobe matchprobes {} |
− | + | edge hivprtplus2cdf utils {} | |
− | mm74cv2mmugprobe matchprobes | + | edge hs133phsentrezgprobe matchprobes {} |
− | dmgenome1dmenst utils | + | edge mm11ksubbmmenseprobe matchprobes {} |
− | + | edge cfcanine2cfensecdf utils {} | |
− | rn34arnentrezgprobe matchprobes | + | edge hs133xptentrezgprobe matchprobes {} |
− | + | edge mm74av1mmentrezgcdf utils {} | |
− | + | edge hs133aptensecdf utils {} | |
− | mm74av2mmenstprobe matchprobes | + | edge hs133bptenst utils {} |
− | + | edge mu19ksubbcdf utils {} | |
− | BSgenome.Celegans.UCSC.ce2 methods | + | edge rn230brnenstprobe matchprobes {} |
− | BSgenome.Celegans.UCSC.ce2 Biostrings | + | edge mm11ksubammenst utils {} |
− | BSgenome.Celegans.UCSC.ce2 BSgenome | + | edge hsex10stv2ptenstcdf utils {} |
− | mmex10stv1mmensecdf utils | + | edge hgu95dcdf utils {} |
− | hs133bhsenseprobe | + | edge mmex10stv1mmrefseqcdf utils {} |
− | + | edge mm74cv2mmrefseqprobe matchprobes {} | |
− | hsfocushsenstcdf utils | + | edge rgu34bprobe matchprobes {} |
− | + | edge hs133av2hsugprobe matchprobes {} | |
− | mm74cv2mmentrezgprobe matchprobes | + | edge drzebrafishdrug utils {} |
− | mm11ksubbmmenstcdf utils | + | edge hs133pptentrezgcdf utils {} |
− | + | edge hs95av2ptentrezgcdf utils {} | |
− | mm74cv2mmenseprobe matchprobes | + | edge mm430mmugcdf utils {} |
− | hs133xhsense utils | + | edge mm430ammenstcdf utils {} |
− | + | edge rn34arnensgprobe matchprobes {} | |
− | dmdrosophila2dmug utils | + | edge mgu74av2cdf utils {} |
− | + | edge ath1121501probe matchprobes {} | |
− | + | edge rn230rnug utils {} | |
− | mm74bv2mmensgprobe matchprobes | + | edge osriceostigr utils {} |
− | + | edge citruscdf utils {} | |
− | rgu34cprobe matchprobes | + | edge mm74av2mmrefseqcdf utils {} |
− | + | edge hs133av2hsense utils {} | |
− | rn230arnugprobe matchprobes | + | edge hs133ahsensecdf utils {} |
− | hs133xptense utils | + | edge hs133phsenseprobe matchprobes {} |
− | hsex10stv2hsenst utils | + | edge hsex10stv2hsenstcdf utils {} |
− | + | edge ggchickenggensecdf utils {} | |
− | hs95av2hsenseprobe matchprobes | + | edge mm74av2mmenstcdf utils {} |
− | mgu74bv2cdf utils | + | edge mm74cv2mmensecdf utils {} |
− | rn34arnrefseqcdf utils | + | edge test3cdf utils {} |
− | hsex10stv2ptenst utils | + | edge ath1atrefseq utils {} |
− | + | edge hs133av2ptense utils {} | |
− | + | edge hs133phsenst utils {} | |
− | dmdrosophila2dmenseprobe matchprobes | + | edge mm74av2mmrefseqprobe matchprobes {} |
− | hthgu133acdf utils | + | edge mm430ammentrezgcdf utils {} |
− | + | edge hu35ksubcprobe matchprobes {} | |
− | agprobe matchprobes | + | edge rn230brnense utils {} |
− | + | edge hs133pptenst utils {} | |
− | hsfocushsentrezgprobe matchprobes | + | edge mm11ksubbmmug utils {} |
− | hs133xhsensg utils | + | edge mm430bmmugcdf utils {} |
− | drzebrafishdrensgcdf utils | + | edge mm430mmenstcdf utils {} |
− | dmgenome1dmensgcdf utils | + | edge mm11ksubammrefseqprobe matchprobes {} |
− | + | edge chickenprobe matchprobes {} | |
− | hu35ksubdprobe matchprobes | + | edge hs133av2hsensg utils {} |
− | + | edge rn230arnentrezgcdf utils {} | |
− | hs133bptensgprobe | + | edge atgenomeatrefseqprobe matchprobes {} |
− | + | edge poplarprobe matchprobes {} | |
− | + | edge rn230arnensecdf utils {} | |
− | + | edge hs133av2hsensgprobe matchprobes {} | |
− | + | edge plasmodiumanophelescdf utils {} | |
− | + | edge hs133xptenstcdf utils {} | |
− | maizeprobe matchprobes | + | edge hs133av2ptensg utils {} |
− | + | edge bsubtilisprobe matchprobes {} | |
− | rn230arnenseprobe matchprobes | + | edge rn230arnrefseqprobe matchprobes {} |
− | drzebrafishdrentrezg utils | + | edge hs95av2hsugprobe matchprobes {} |
− | hs133xptensg utils | + | edge hs133av2ptenstprobe matchprobes {} |
− | hs133pptenstcdf utils | + | edge mm74cv2mmense utils {} |
− | + | edge hs133pptensgprobe matchprobes {} | |
− | mm74av2mmenst utils | + | edge rn230brnensg utils {} |
− | + | edge hs133xptenseprobe matchprobes {} | |
− | vvgrapevvtigrprobe matchprobes | + | edge rae230acdf utils {} |
− | hsex10stv2hsugcdf utils | + | edge mu11ksubbcdf utils {} |
− | hs133bptenstcdf utils | + | edge hs133xhsentrezgcdf utils {} |
− | paeg1acdf utils | + | edge mouse430a2cdf utils {} |
− | mm11ksubammug utils | + | edge hgfocusprobe matchprobes {} |
− | mm430ammugcdf utils | + | edge hs133xhsenstcdf utils {} |
− | ggchickenggrefseq utils | + | edge drosgenome1cdf utils {} |
− | + | edge hsex10stv2hsentrezgcdf utils {} | |
− | hs95av2ptensgprobe matchprobes | + | edge rn230rnensecdf utils {} |
− | hs133av2hsrefseqcdf utils | + | edge rn230brnrefseq utils {} |
− | + | edge cfcanine2cfentrezgprobe matchprobes {} | |
− | mmex10stv1mmenseprobe matchprobes | + | edge hs133av2ptentrezgcdf utils {} |
− | + | edge hs133xhsentrezgprobe matchprobes {} | |
− | mm430ammensgprobe matchprobes | + | edge rn230brnenseprobe matchprobes {} |
− | + | edge hsfocushsensgprobe matchprobes {} | |
− | hs133ahsrefseqprobe matchprobes | + | edge hs133av2hsrefseq utils {} |
− | + | edge mm74cv2mmensg utils {} | |
− | hs133bhsense utils | + | edge mm430ammugprobe matchprobes {} |
− | hs133phsenstcdf utils | + | edge hsfocusptenstprobe matchprobes {} |
− | hs133bptentrezgcdf utils | + | edge mm11ksubammensgcdf utils {} |
− | + | edge hsfocusptensecdf utils {} | |
− | hgu133aprobe matchprobes | + | edge hsex10stv2hsrefseq utils {} |
− | hs133bhsenstcdf utils | + | edge rn230rnensgprobe matchprobes {} |
− | dmdrosophila2dmrefseq utils | + | edge hs133xhsrefseq utils {} |
− | hs133bptense utils | + | edge mm430bmmensgprobe matchprobes {} |
− | + | edge mm11ksubammentrezg utils {} | |
− | mm74av2mmenseprobe matchprobes | + | edge hsex10stv2hsugprobe matchprobes {} |
− | mm11ksubammense utils | + | edge ath1atrefseqprobe matchprobes {} |
− | hu35ksubbcdf utils | + | edge mm74av2mmugprobe matchprobes {} |
− | mmex10stv1mmenst utils | + | edge mm74av2mmugcdf utils {} |
− | dmdrosophila2dmenstcdf utils | + | edge rnu34cdf utils {} |
− | + | edge mm74cv2mmug utils {} | |
− | hsfocushsugprobe matchprobes | + | edge osriceostigrcdf utils {} |
− | atgenomeattigr utils | + | edge mm11ksubammentrezgprobe matchprobes {} |
− | hgu133atagcdf utils | + | edge mmex10stv1mmug utils {} |
− | + | edge hs95av2ptentrezgprobe matchprobes {} | |
− | mm11ksubbmmugprobe matchprobes | + | edge drzebrafishdrrefseqcdf utils {} |
− | drzebrafishdrenst utils | + | edge cfcanine2cfensgprobe matchprobes {} |
− | hgu133a2cdf utils | + | edge hs95av2hsenst utils {} |
− | drzebrafishdrenstprobe | + | edge hsfocushsensecdf utils {} |
− | + | edge ath1attaircdf utils {} | |
− | hs133phsentrezgcdf utils | + | edge mm430mmugprobe matchprobes {} |
− | hs95av2hsugcdf utils | + | edge mm11ksubbmmenst utils {} |
− | hs133bhsensg utils | + | edge moe430acdf utils {} |
− | hs95av2hsentrezgcdf utils | + | edge hsfocushsenst utils {} |
− | ye6100subccdf utils | + | edge mm11ksubbmmensecdf utils {} |
− | + | edge rn230arnenst utils {} | |
− | rn34arnrefseqprobe matchprobes | + | edge hs95av2ptenst utils {} |
− | hsfocushsrefseqcdf utils | + | edge hsfocusptenst utils {} |
− | hsex10stv2hsug utils | + | edge mm430ammug utils {} |
− | rn230brnenstcdf utils | + | edge mgu74aprobe matchprobes {} |
− | hs133phsense utils | + | edge rnex10stv1rnenstprobe matchprobes {} |
− | hs133bptensg utils | + | edge ggchickenggensgprobe matchprobes {} |
− | mm11ksubammensg utils | + | edge hs133bhsug utils {} |
− | + | edge mm11ksubammentrezgcdf utils {} | |
− | + | edge cfcanine2cfensgcdf utils {} | |
− | rn230rnrefseqcdf utils | + | edge hs133av2ptenseprobe matchprobes {} |
− | mu6500subacdf utils | + | edge hs133aptensgcdf utils {} |
− | hs133pptense utils | + | edge cfcanine2cfentrezg utils {} |
− | + | edge rn230brnugcdf utils {} | |
− | tomatoprobe matchprobes | + | edge hs133aptentrezg utils {} |
− | rgu34acdf utils | + | edge mm11ksubammrefseq utils {} |
− | mm430bmmrefseqcdf utils | + | edge rae230bprobe matchprobes {} |
− | + | edge mouse430a2probe matchprobes {} | |
− | osriceosrefseqprobe matchprobes | + | edge hs133xhsugprobe matchprobes {} |
− | + | edge mm74cv2mmrefseq utils {} | |
− | dmdrosophila2dmugcdf utils | + | edge hgu133atagprobe matchprobes {} |
− | + | edge hs133pptensecdf utils {} | |
− | bovineprobe matchprobes | + | edge hsex10stv2hsensgprobe matchprobes {} |
− | hgu95av2cdf utils | + | edge rn34arnense utils {} |
− | + | edge hs133ahsensgcdf utils {} | |
− | mm74bv2mmensgcdf utils | + | edge dmgenome1dmrefseqcdf utils {} |
− | mm11ksubbmmugcdf utils | + | edge rnex10stv1rnenstcdf utils {} |
− | + | edge ggchickenggensgcdf utils {} | |
− | mgu74bcdf utils | + | edge mm74cv2mmensgcdf utils {} |
− | mm74av1mmugcdf utils | + | edge hs133bptensecdf utils {} |
− | cfcanine2cfrefseqcdf utils | + | edge rnex10stv1rnug utils {} |
− | + | edge drzebrafishdrrefseqprobe matchprobes {} | |
− | hu6800subbcdf utils | + | edge mm11ksubammensgprobe matchprobes {} |
− | hs133phsensg utils | + | edge hs133ahsentrezg utils {} |
− | rn34arnenstcdf utils | + | edge hs133phsrefseq utils {} |
− | mm74bv2mmentrezg utils | + | edge riceprobe matchprobes {} |
− | + | edge mm74cv2mmentrezg utils {} | |
− | mm74av1mmentrezgprobe matchprobes | + | edge hsex10stv2ptenstprobe matchprobes {} |
− | mm430mmenst utils | + | edge hsfocusptenseprobe matchprobes {} |
− | hsfocushsugcdf utils | + | edge mm430bmmenstcdf utils {} |
− | + | edge barley1cdf utils {} | |
− | test3probe matchprobes | + | edge hs133phsensecdf utils {} |
− | + | edge hgu95dprobe matchprobes {} | |
− | soybeanprobe matchprobes | + | edge celeganscdf utils {} |
− | + | edge hs133bhsensecdf utils {} | |
− | mmex10stv1mmensgcdf utils | + | edge rn34arnensg utils {} |
− | + | edge mm430ammense utils {} | |
− | hs133pptensg utils | + | edge mm430ammrefseq utils {} |
− | mm74av1mmenstcdf utils | + | edge rn230arnensgcdf utils {} |
− | + | edge hs95av2hsentrezgprobe matchprobes {} | |
− | dmgenome1dmenstprobe matchprobes | + | edge dmdrosophila2dmensecdf utils {} |
− | hgu95bcdf utils | + | edge rn230arnentrezg utils {} |
− | mgu74bprobe | + | edge mm74bv2mmenstprobe matchprobes {} |
− | + | edge ecoli2probe matchprobes {} | |
− | + | edge cfcanine2cfugcdf utils {} | |
− | mmex10stv1mmentrezg utils | + | edge hs133ahsentrezgcdf utils {} |
− | hs133xhsugcdf utils | + | edge hs133bhsensgprobe matchprobes {} |
− | + | edge rn230brnensecdf utils {} | |
− | hs133phsugprobe matchprobes | + | edge rn230rnensgcdf utils {} |
− | ggchickenggrefseqcdf utils | + | edge rnex10stv1rnenseprobe matchprobes {} |
− | cfcanine2cfenst utils | + | edge mm430ammensg utils {} |
− | + | edge mm74cv2mmensgprobe matchprobes {} | |
− | mm430ammrefseqprobe matchprobes | + | edge mm11ksubbmmrefseqcdf utils {} |
− | mm74av2mmug utils | + | edge PFAM RSQLite {} |
− | + | edge rn230rnentrezg utils {} | |
− | mm430mmensgprobe matchprobes | + | edge hs133bptenstprobe matchprobes {} |
− | hs133phsugcdf utils | + | edge hs133av2hsenst utils {} |
− | + | edge drosophila2probe matchprobes {} | |
− | hs133bhsugprobe matchprobes | + | edge u133x3pcdf utils {} |
− | hs133ahsenst utils | + | edge hs95av2hsensgprobe matchprobes {} |
− | rnex10stv1rnentrezgcdf utils | + | edge hs133av2ptenst utils {} |
− | hs133ahsug utils | + | edge sugarcanecdf utils {} |
− | + | edge medicagocdf utils {} | |
− | dmdrosophila2dmugprobe matchprobes | + | edge rtu34cdf utils {} |
− | mm11ksubbmmrefseq utils | + | edge hsfocusptensgcdf utils {} |
− | hs133aptenst utils | + | edge dmdrosophila2dmensgprobe matchprobes {} |
− | + | edge rn230brnenst utils {} | |
− | hs133av2hsentrezgcdf utils | + | edge rnex10stv1rnrefseqprobe matchprobes {} |
− | test1cdf utils | + | edge hs95av2ptenstprobe matchprobes {} |
− | + | edge hsfocusptentrezg utils {} | |
− | rn230arnugcdf utils | + | edge rnex10stv1rnugprobe matchprobes {} |
− | maizecdf utils | + | edge mm430ammenstprobe matchprobes {} |
− | + | edge hgu133bcdf utils {} | |
− | + | edge rn34arnensecdf utils {} | |
− | + | edge hu35ksubacdf utils {} | |
− | + | edge hs133phsrefseqcdf utils {} | |
− | plasmodiumanophelesprobe matchprobes | + | edge ggchickenggense utils {} |
− | + | edge xenopuslaevisprobe matchprobes {} | |
− | drzebrafishdrenseprobe matchprobes | + | edge hcg110cdf utils {} |
− | + | edge hs133ahsrefseq utils {} | |
− | hs133ahsensgprobe matchprobes | + | edge mm11ksubbmmentrezgprobe matchprobes {} |
− | hsex10stv2hsrefseqcdf utils | + | edge hsex10stv2ptenseprobe matchprobes {} |
− | rn34arnrefseq utils | + | edge mm74av1mmensecdf utils {} |
− | mm74av1mmrefseq utils | + | edge rn230arnensgprobe matchprobes {} |
− | + | edge rn230rnrefseq utils {} | |
− | gp53cdf utils | + | edge hs133ahsugcdf utils {} |
− | mm11ksubammrefseqcdf utils | + | edge hsfocushsentrezgcdf utils {} |
− | + | edge mu11ksubaprobe matchprobes {} | |
− | ecoliasv2probe matchprobes | + | edge drzebrafishdrenstcdf utils {} |
− | rn230brnugprobe | + | edge dmgenome1dmenstcdf utils {} |
− | + | edge mm430bmmugprobe matchprobes {} | |
− | + | edge hsfocushsensgcdf utils {} | |
− | + | edge mm11ksubbmmensgcdf utils {} | |
− | hs133aptenstprobe matchprobes | + | edge ye6100subbcdf utils {} |
− | + | edge mmex10stv1mmentrezgcdf utils {} | |
− | atgenomeattairprobe matchprobes | + | edge hsfocushsentrezg utils {} |
− | hs133av2ptenstcdf utils | + | edge canine2cdf utils {} |
− | + | edge hs133xptentrezgcdf utils {} | |
− | mgu74cv2probe matchprobes | + | edge hs133bhsrefseqprobe matchprobes {} |
− | hs95av2hsense utils | + | edge mm74cv2mmenst utils {} |
− | ggchickenggug utils | + | edge mm11ksubbmmentrezg utils {} |
− | + | edge ecolicdf utils {} | |
− | hgu95eprobe matchprobes | + | edge mm74bv2mmugcdf utils {} |
− | + | edge hsex10stv2ptentrezgcdf utils {} | |
− | hs133pptentrezgprobe matchprobes | + | edge rnex10stv1rnense utils {} |
− | + | edge vvgrapevvtigrcdf utils {} | |
− | canine2probe matchprobes | + | edge mmex10stv1mmensgprobe matchprobes {} |
− | mm11ksubbmmense utils | + | edge ggchickenggensg utils {} |
− | hsfocushsense utils | + | edge rnex10stv1rnentrezgprobe matchprobes {} |
− | + | edge hsfocushsug utils {} | |
− | + | edge rn230rnense utils {} | |
− | + | edge mm74bv2mmenseprobe matchprobes {} | |
− | mm11ksubbmmenstprobe matchprobes | + | edge rgu34aprobe matchprobes {} |
− | rn230arnense utils | + | edge vvgrapevvtigr utils {} |
− | hs95av2ptense utils | + | edge mm74av2mmensgprobe matchprobes {} |
− | ath1attigr utils | + | edge rhesuscdf utils {} |
− | + | edge zebrafishprobe matchprobes {} | |
− | yeast2probe matchprobes | + | edge hsfocushsrefseqprobe matchprobes {} |
− | mm430bmmrefseq utils | + | edge mgu74acdf utils {} |
− | hsfocusptense utils | + | edge hu6800subacdf utils {} |
− | hs133av2hsenstcdf utils | + | edge rnex10stv1rnensg utils {} |
− | agcdf utils | + | edge hs133pptensgcdf utils {} |
− | + | edge hs133av2ptensecdf utils {} | |
− | rn34arnugprobe matchprobes | + | edge hu35ksubbprobe matchprobes {} |
− | hs133xhsenst utils | + | edge rnu34probe matchprobes {} |
− | + | edge xenopuslaeviscdf utils {} | |
− | hs95av2hsensg utils | + | edge hs133bptenseprobe matchprobes {} |
− | hu35ksubdcdf utils | + | edge rn230rnensg utils {} |
− | + | edge rn34arnug utils {} | |
− | mm74av1mmugprobe matchprobes | + | edge rn230brnrefseqcdf utils {} |
− | + | edge dmgenome1dmrefseq utils {} | |
− | + | edge hs133bptensgcdf utils {} | |
− | dmgenome1dmenseprobe matchprobes | + | edge hs133pptentrezg utils {} |
− | mm11ksubbmmensg utils | + | edge mm430bmmense utils {} |
− | + | edge hgu95acdf utils {} | |
− | hs133xptenst utils | + | edge ath1atrefseqcdf utils {} |
− | hsfocushsensg utils | + | edge hs133av2ptentrezgprobe matchprobes {} |
− | + | edge hs133bptentrezg utils {} | |
− | cfcanine2cfrefseqprobe matchprobes | + | edge hs133xhsrefseqprobe matchprobes {} |
− | + | edge hs133phsensgcdf utils {} | |
− | hs133phsenstprobe matchprobes | + | edge hs133av2hsensecdf utils {} |
− | hs133bhsrefseqcdf utils | + | edge hs95av2ptenseprobe matchprobes {} |
− | rn230arnensg utils | + | edge rn230arnentrezgprobe matchprobes {} |
− | hs95av2ptensg utils | + | edge mm430ammentrezgprobe matchprobes {} |
− | + | edge mm430ammenseprobe matchprobes {} | |
− | mm430mmug utils | + | edge hs133aptentrezgprobe matchprobes {} |
− | + | edge hs133bhsensgcdf utils {} | |
− | mm74cv2mmrefseqcdf utils | + | edge hs133phsentrezg utils {} |
− | ath1121501cdf utils | + | edge mm74bv2mmense utils {} |
− | hsfocusptensg utils | + | edge rat2302probe matchprobes {} |
− | ricecdf utils | + | edge mouse4302probe matchprobes {} |
− | + | edge hs133bhsentrezg utils {} | |
− | mm11ksubammensecdf utils | + | edge mm430mmenstprobe matchprobes {} |
− | + | edge atgenomeattair utils {} | |
− | wheatprobe matchprobes | + | edge mm430bmmensg utils {} |
− | hs133av2hsugcdf utils | + | edge drzebrafishdrugprobe matchprobes {} |
− | drosophila2cdf utils | + | edge ecoli2cdf utils {} |
− | + | edge dmgenome1dmugprobe matchprobes {} | |
− | moe430aprobe matchprobes | + | edge dmdrosophila2dmensgcdf utils {} |
− | hs95av2ptenstcdf utils | + | edge bsubtiliscdf utils {} |
− | hs95av2hsrefseqcdf utils | + | edge mm74bv2mmenstcdf utils {} |
− | + | edge rn230arnrefseq utils {} | |
− | hgu95aprobe matchprobes | + | edge hs133av2hsrefseqprobe matchprobes {} |
− | atgenomeattigrcdf utils | + | edge atgenomeatrefseq utils {} |
− | + | edge mm430bmmrefseqprobe matchprobes {} | |
− | barley1probe matchprobes | + | edge hs95av2ptensecdf utils {} |
− | + | edge ygs98cdf utils {} | |
− | + | edge hs133ahsenstprobe matchprobes {} | |
− | mm74av1mmensgprobe matchprobes | + | edge mm74bv2mmensg utils {} |
− | mu6500subccdf utils | + | edge rn230brnensgcdf utils {} |
− | + | edge hgu133plus2cdf utils {} | |
− | dmdrosophila2dmrefseqcdf utils | + | edge mmex10stv1mmenstcdf utils {} |
− | + | edge mmex10stv1mmrefseqprobe matchprobes {} | |
− | dmgenome1dmrefseqprobe matchprobes | + | edge ygs98probe matchprobes {} |
− | rgu34ccdf utils | + | edge rn230brnentrezg utils {} |
− | + | edge hsex10stv2hsrefseqprobe matchprobes {} | |
− | + | edge rn34arnenst utils {} | |
− | hs133xhsensgprobe matchprobes | + | edge hs95av2hsensecdf utils {} |
− | hsfocushsrefseq utils | + | edge mm430mmrefseqprobe matchprobes {} |
− | + | edge mm74bv2mmentrezgprobe matchprobes {} | |
− | hcg110probe | + | edge drzebrafishdrensgprobe matchprobes {} |
− | + | edge cfcanine2cfug utils {} | |
− | + | edge rn34arnensgcdf utils {} | |
− | hs95av2hsenstcdf utils | + | edge hu35ksubccdf utils {} |
− | mm430mmentrezgcdf utils | + | edge mm430bmmug utils {} |
− | hs133bhsrefseq utils | + | edge rn34arnentrezg utils {} |
− | + | edge mm74av1mmensgcdf utils {} | |
− | hs133aptenseprobe matchprobes | + | edge hs133av2hsentrezgprobe matchprobes {} |
− | + | edge mm430ammenst utils {} | |
− | rn230rnrefseqprobe matchprobes | + | edge u133aaofav2cdf utils {} |
− | + | edge hsex10stv2ptensecdf utils {} | |
− | hs133xptenstprobe matchprobes | + | edge ggchickenggugcdf utils {} |
− | + | edge mm74av1mmentrezg utils {} | |
− | BSgenome.Mmusculus.UCSC.mm7 methods | + | edge drzebrafishdrrefseq utils {} |
− | BSgenome.Mmusculus.UCSC.mm7 Biostrings | + | edge ecoliprobe matchprobes {} |
− | BSgenome.Mmusculus.UCSC.mm7 BSgenome | + | edge ye6100subdcdf utils {} |
− | + | edge hs95av2hsug utils {} | |
− | mu11ksubbprobe matchprobes | + | edge porcineprobe matchprobes {} |
− | rn230arnrefseqcdf utils | + | edge mm430ammensecdf utils {} |
− | osriceosrefseq utils | + | edge hs133aptentrezgcdf utils {} |
− | hu6800subdcdf utils | + | edge mm74bv2mmrefseq utils {} |
− | mm74bv2mmug utils | + | edge hs133ahsentrezgprobe matchprobes {} |
− | + | edge mm430mmenseprobe matchprobes {} | |
− | ecoliasv2cdf utils | + | edge ath1attigrprobe matchprobes {} |
− | hs133bhsenst utils | + | edge rn230rnentrezgcdf utils {} |
− | + | edge hsex10stv2hsensecdf utils {} | |
− | mm74av2mmentrezgprobe matchprobes | + | edge mu6500subbcdf utils {} |
− | hivprtplus2cdf utils | + | edge mm74av2mmensecdf utils {} |
− | + | edge mm74av2mmentrezgcdf utils {} | |
− | hs133phsentrezgprobe matchprobes | + | edge rgu34bcdf utils {} |
− | + | edge rae230aprobe matchprobes {} | |
− | mm11ksubbmmenseprobe matchprobes | + | edge sugarcaneprobe matchprobes {} |
− | cfcanine2cfensecdf utils | + | edge mm74bv2mmugprobe matchprobes {} |
− | + | edge saureuscdf utils {} | |
− | hs133xptentrezgprobe matchprobes | + | edge mgu74av2probe matchprobes {} |
− | mm74av1mmentrezgcdf utils | + | edge htratfocuscdf utils {} |
− | hs133aptensecdf utils | + | edge mm74av1mmenstprobe matchprobes {} |
− | hs133bptenst utils | + | edge mm430mmensecdf utils {} |
− | mu19ksubbcdf utils | + | edge dmgenome1dmensgprobe matchprobes {} |
− | + | edge drzebrafishdrentrezgcdf utils {} | |
− | rn230brnenstprobe matchprobes | + | edge mgu74ccdf utils {} |
− | mm11ksubammenst utils | + | edge mm74cv2mmugcdf utils {} |
− | hsex10stv2ptenstcdf utils | + | edge hu6800subccdf utils {} |
− | hgu95dcdf utils | + | edge hs133ahsenseprobe matchprobes {} |
− | mmex10stv1mmrefseqcdf utils | + | edge hs133xhsenstprobe matchprobes {} |
− | mm74cv2mmrefseqprobe | + | edge mmex10stv1mmugprobe matchprobes {} |
− | + | edge rnex10stv1rnrefseqcdf utils {} | |
− | + | edge mouse4302cdf utils {} | |
− | rgu34bprobe matchprobes | + | edge hs133av2ptensgcdf utils {} |
− | + | edge paeg1aprobe matchprobes {} | |
− | hs133av2hsugprobe matchprobes | + | edge hs133xptensecdf utils {} |
− | drzebrafishdrug utils | + | edge mu19ksubacdf utils {} |
− | hs133pptentrezgcdf utils | + | edge hs133av2ptentrezg utils {} |
− | hs95av2ptentrezgcdf utils | + | edge hgu95ccdf utils {} |
− | mm430mmugcdf utils | + | edge mm430bmmentrezgcdf utils {} |
− | mm430ammenstcdf utils | + | edge hsfocusptentrezgcdf utils {} |
− | + | edge ath1attair utils {} | |
− | rn34arnensgprobe matchprobes | + | edge ggchickenggenst utils {} |
− | mgu74av2cdf utils | + | edge wheatcdf utils {} |
− | + | edge celegansprobe matchprobes {} | |
− | ath1121501probe matchprobes | + | edge hgu95cprobe matchprobes {} |
− | rn230rnug utils | + | edge vitisviniferaprobe matchprobes {} |
− | osriceostigr utils | + | edge hgu95av2probe matchprobes {} |
− | citruscdf utils | + | edge drosgenome1probe matchprobes {} |
− | + | edge hs133av2hsensgcdf utils {} | |
− | mm74av2mmrefseqcdf utils | + | edge rn230brnentrezgprobe matchprobes {} |
− | hs133av2hsense utils | + | edge mm430bmmentrezgprobe matchprobes {} |
− | hs133ahsensecdf utils | + | edge hs133bptentrezgprobe matchprobes {} |
− | + | edge rn230brnentrezgcdf utils {} | |
− | hs133phsenseprobe matchprobes | + | edge hs133xhsensecdf utils {} |
− | + | edge hs133av2hsentrezg utils {} | |
− | hsex10stv2hsenstcdf utils | + | edge osriceosrefseqcdf utils {} |
− | ggchickenggensecdf utils | + | edge hgfocuscdf utils {} |
− | mm74av2mmenstcdf utils | + | edge test2cdf utils {} |
− | mm74cv2mmensecdf utils | + | edge hs133aptensgprobe matchprobes {} |
− | test3cdf utils | + | edge mmex10stv1mmugcdf utils {} |
− | ath1atrefseq utils | + | edge rn34arnenstprobe matchprobes {} |
− | hs133av2ptense utils | + | edge rnex10stv1rnenst utils {} |
− | hs133phsenst utils | + | edge dmdrosophila2dmense utils {} |
− | + | edge mm74av1mmense utils {} | |
− | mm74av2mmrefseqprobe matchprobes | + | edge rn230arnug utils {} |
− | mm430ammentrezgcdf utils | + | edge rn230rnenst utils {} |
− | + | edge mm11ksubbmmensgprobe matchprobes {} | |
− | hu35ksubcprobe matchprobes | + | edge drzebrafishdrentrezgprobe matchprobes {} |
− | rn230brnense utils | + | edge rn34arnentrezgcdf utils {} |
− | hs133pptenst utils | + | edge hs95av2ptensgcdf utils {} |
− | mm11ksubbmmug utils | + | edge hsex10stv2ptentrezgprobe matchprobes {} |
− | mm430bmmugcdf utils | + | edge hs133av2hsug utils {} |
− | mm430mmenstcdf utils | + | edge mm74bv2mmrefseqcdf utils {} |
− | + | edge hs95av2ptentrezg utils {} | |
− | mm11ksubammrefseqprobe matchprobes | + | edge dmgenome1dmug utils {} |
− | + | edge mgu74cv2cdf utils {} | |
− | chickenprobe matchprobes | + | edge rn34arnugcdf utils {} |
− | + | edge dmdrosophila2dmensg utils {} | |
− | hs133av2hsensg utils | + | edge mm74av1mmensg utils {} |
− | rn230arnentrezgcdf utils | + | edge mm74av1mmenseprobe matchprobes {} |
− | + | edge hs133bhsugcdf utils {} | |
− | atgenomeatrefseqprobe matchprobes | + | edge mm430bmmenst utils {} |
− | + | edge hs133av2hsenstprobe matchprobes {} | |
− | poplarprobe matchprobes | + | edge hs133phsensgprobe matchprobes {} |
− | rn230arnensecdf utils | + | edge hs95av2hsensgcdf utils {} |
− | + | edge mu11ksubacdf utils {} | |
− | hs133av2hsensgprobe matchprobes | + | edge hs133xhsenseprobe matchprobes {} |
− | plasmodiumanophelescdf utils | + | edge ggchickenggrefseqprobe matchprobes {} |
− | hs133xptenstcdf utils | + | edge porcinecdf utils {} |
− | hs133av2ptensg utils | + | edge u133x3pprobe matchprobes {} |
− | bsubtilisprobe | + | edge mm11ksubbmmrefseqprobe matchprobes {} |
− | + | edge hs95av2hsentrezg utils {} | |
− | + | edge hu6800probe matchprobes {} | |
− | rn230arnrefseqprobe matchprobes | + | edge hs133pptenstprobe matchprobes {} |
− | + | edge mm74bv2mmrefseqprobe matchprobes {} | |
− | + | edge ath1attigrcdf utils {} | |
− | hs95av2hsugprobe matchprobes | + | edge mm74bv2mmenst utils {} |
− | + | edge vitisviniferacdf utils {} | |
− | hs133av2ptenstprobe matchprobes | + | edge hsex10stv2ptensgcdf utils {} |
− | mm74cv2mmense utils | + | edge LogitBoost NONE {} |
− | + | edge XML methods {} | |
− | hs133pptensgprobe matchprobes | + | edge RMySQL methods {} |
− | rn230brnensg utils | + | edge RMySQL DBI {} |
− | + | edge SSOAP methods {} | |
− | hs133xptenseprobe matchprobes | + | edge SSOAP XML {} |
− | rae230acdf utils | + | edge SSOAP RCurl {} |
− | + | edge RCurl methods {} | |
− | mu11ksubbcdf utils | + | }} |
− | hs133xhsentrezgcdf utils | ||
− | mouse430a2cdf utils | ||
− | |||
− | hgfocusprobe matchprobes | ||
− | |||
− | hs133xhsenstcdf utils | ||
− | drosgenome1cdf utils | ||
− | hsex10stv2hsentrezgcdf utils | ||
− | rn230rnensecdf utils | ||
− | |||
− | rn230brnrefseq utils | ||
− | |||
− | cfcanine2cfentrezgprobe matchprobes | ||
− | |||
− | hs133av2ptentrezgcdf utils | ||
− | |||
− | hs133xhsentrezgprobe matchprobes | ||
− | |||
− | rn230brnenseprobe matchprobes | ||
− | |||
− | hsfocushsensgprobe matchprobes | ||
− | |||
− | |||
− | |||
− | mm74cv2mmensg utils | ||
− | |||
− | mm430ammugprobe matchprobes | ||
− | |||
− | |||
− | |||
− | hsfocusptenstprobe matchprobes | ||
− | mm11ksubammensgcdf utils | ||
− | hsfocusptensecdf utils | ||
− | hsex10stv2hsrefseq utils | ||
− | |||
− | rn230rnensgprobe matchprobes | ||
− | |||
− | hs133xhsrefseq utils | ||
− | |||
− | mm430bmmensgprobe matchprobes | ||
− | mm11ksubammentrezg utils | ||
− | |||
− | hsex10stv2hsugprobe matchprobes | ||
− | |||
− | |||
− | ath1atrefseqprobe matchprobes | ||
− | |||
− | mm74av2mmugprobe matchprobes | ||
− | mm74av2mmugcdf utils | ||
− | rnu34cdf utils | ||
− | mm74cv2mmug utils | ||
− | osriceostigrcdf utils | ||
− | |||
− | mm11ksubammentrezgprobe matchprobes | ||
− | mmex10stv1mmug utils | ||
− | |||
− | hs95av2ptentrezgprobe matchprobes | ||
− | drzebrafishdrrefseqcdf utils | ||
− | |||
− | |||
− | |||
− | cfcanine2cfensgprobe matchprobes | ||
− | hs95av2hsenst utils | ||
− | hsfocushsensecdf utils | ||
− | ath1attaircdf utils | ||
− | |||
− | mm430mmugprobe matchprobes | ||
− | mm11ksubbmmenst utils | ||
− | moe430acdf utils | ||
− | hsfocushsenst utils | ||
− | mm11ksubbmmensecdf utils | ||
− | rn230arnenst utils | ||
− | hs95av2ptenst utils | ||
− | |||
− | hsfocusptenst utils | ||
− | |||
− | mm430ammug utils | ||
− | |||
− | mgu74aprobe matchprobes | ||
− | |||
− | |||
− | rnex10stv1rnenstprobe matchprobes | ||
− | |||
− | ggchickenggensgprobe matchprobes | ||
− | hs133bhsug utils | ||
− | mm11ksubammentrezgcdf utils | ||
− | cfcanine2cfensgcdf utils | ||
− | |||
− | |||
− | hs133av2ptenseprobe matchprobes | ||
− | hs133aptensgcdf utils | ||
− | cfcanine2cfentrezg utils | ||
− | rn230brnugcdf utils | ||
− | hs133aptentrezg utils | ||
− | |||
− | mm11ksubammrefseq utils | ||
− | |||
− | rae230bprobe matchprobes | ||
− | |||
− | mouse430a2probe matchprobes | ||
− | |||
− | hs133xhsugprobe matchprobes | ||
− | mm74cv2mmrefseq utils | ||
− | |||
− | hgu133atagprobe matchprobes | ||
− | |||
− | hs133pptensecdf utils | ||
− | |||
− | hsex10stv2hsensgprobe matchprobes | ||
− | rn34arnense utils | ||
− | hs133ahsensgcdf utils | ||
− | dmgenome1dmrefseqcdf utils | ||
− | rnex10stv1rnenstcdf utils | ||
− | ggchickenggensgcdf utils | ||
− | mm74cv2mmensgcdf utils | ||
− | hs133bptensecdf utils | ||
− | rnex10stv1rnug utils | ||
− | |||
− | drzebrafishdrrefseqprobe matchprobes | ||
− | |||
− | mm11ksubammensgprobe matchprobes | ||
− | hs133ahsentrezg utils | ||
− | |||
− | hs133phsrefseq utils | ||
− | |||
− | riceprobe matchprobes | ||
− | mm74cv2mmentrezg utils | ||
− | |||
− | hsex10stv2ptenstprobe matchprobes | ||
− | |||
− | hsfocusptenseprobe matchprobes | ||
− | mm430bmmenstcdf utils | ||
− | barley1cdf utils | ||
− | hs133phsensecdf utils | ||
− | |||
− | |||
− | hgu95dprobe matchprobes | ||
− | celeganscdf utils | ||
− | hs133bhsensecdf utils | ||
− | |||
− | rn34arnensg utils | ||
− | mm430ammense utils | ||
− | mm430ammrefseq utils | ||
− | rn230arnensgcdf utils | ||
− | |||
− | hs95av2hsentrezgprobe matchprobes | ||
− | dmdrosophila2dmensecdf utils | ||
− | rn230arnentrezg utils | ||
− | |||
− | mm74bv2mmenstprobe matchprobes | ||
− | |||
− | ecoli2probe matchprobes | ||
− | cfcanine2cfugcdf utils | ||
− | hs133ahsentrezgcdf utils | ||
− | |||
− | hs133bhsensgprobe matchprobes | ||
− | rn230brnensecdf utils | ||
− | rn230rnensgcdf utils | ||
− | |||
− | |||
− | rnex10stv1rnenseprobe matchprobes | ||
− | mm430ammensg utils | ||
− | |||
− | mm74cv2mmensgprobe matchprobes | ||
− | mm11ksubbmmrefseqcdf utils | ||
− | |||
− | PFAM RSQLite | ||
− | rn230rnentrezg utils | ||
− | hs133bptenstprobe | ||
− | |||
− | |||
− | hs133av2hsenst utils | ||
− | |||
− | drosophila2probe matchprobes | ||
− | u133x3pcdf utils | ||
− | |||
− | hs95av2hsensgprobe matchprobes | ||
− | hs133av2ptenst utils | ||
− | sugarcanecdf utils | ||
− | medicagocdf utils | ||
− | rtu34cdf utils | ||
− | hsfocusptensgcdf utils | ||
− | |||
− | dmdrosophila2dmensgprobe matchprobes | ||
− | rn230brnenst utils | ||
− | |||
− | rnex10stv1rnrefseqprobe matchprobes | ||
− | |||
− | hs95av2ptenstprobe matchprobes | ||
− | hsfocusptentrezg utils | ||
− | |||
− | rnex10stv1rnugprobe matchprobes | ||
− | |||
− | mm430ammenstprobe matchprobes | ||
− | hgu133bcdf utils | ||
− | rn34arnensecdf utils | ||
− | hu35ksubacdf utils | ||
− | hs133phsrefseqcdf utils | ||
− | ggchickenggense utils | ||
− | |||
− | xenopuslaevisprobe matchprobes | ||
− | hcg110cdf utils | ||
− | hs133ahsrefseq utils | ||
− | |||
− | mm11ksubbmmentrezgprobe matchprobes | ||
− | |||
− | hsex10stv2ptenseprobe matchprobes | ||
− | mm74av1mmensecdf utils | ||
− | |||
− | rn230arnensgprobe matchprobes | ||
− | rn230rnrefseq utils | ||
− | hs133ahsugcdf utils | ||
− | hsfocushsentrezgcdf utils | ||
− | |||
− | mu11ksubaprobe matchprobes | ||
− | drzebrafishdrenstcdf utils | ||
− | dmgenome1dmenstcdf utils | ||
− | |||
− | mm430bmmugprobe matchprobes | ||
− | hsfocushsensgcdf utils | ||
− | mm11ksubbmmensgcdf utils | ||
− | ye6100subbcdf utils | ||
− | mmex10stv1mmentrezgcdf utils | ||
− | hsfocushsentrezg utils | ||
− | canine2cdf utils | ||
− | hs133xptentrezgcdf utils | ||
− | hs133bhsrefseqprobe | ||
− | |||
− | mm74cv2mmenst utils | ||
− | mm11ksubbmmentrezg utils | ||
− | ecolicdf utils | ||
− | mm74bv2mmugcdf utils | ||
− | hsex10stv2ptentrezgcdf utils | ||
− | rnex10stv1rnense utils | ||
− | |||
− | vvgrapevvtigrcdf utils | ||
− | |||
− | mmex10stv1mmensgprobe matchprobes | ||
− | ggchickenggensg utils | ||
− | |||
− | rnex10stv1rnentrezgprobe matchprobes | ||
− | hsfocushsug utils | ||
− | rn230rnense utils | ||
− | |||
− | mm74bv2mmenseprobe matchprobes | ||
− | |||
− | rgu34aprobe matchprobes | ||
− | |||
− | vvgrapevvtigr utils | ||
− | |||
− | mm74av2mmensgprobe matchprobes | ||
− | rhesuscdf utils | ||
− | |||
− | zebrafishprobe matchprobes | ||
− | |||
− | hsfocushsrefseqprobe matchprobes | ||
− | |||
− | mgu74acdf utils | ||
− | hu6800subacdf utils | ||
− | rnex10stv1rnensg utils | ||
− | hs133pptensgcdf utils | ||
− | hs133av2ptensecdf utils | ||
− | |||
− | hu35ksubbprobe matchprobes | ||
− | |||
− | rnu34probe matchprobes | ||
− | xenopuslaeviscdf utils | ||
− | |||
− | hs133bptenseprobe matchprobes | ||
− | |||
− | rn230rnensg utils | ||
− | rn34arnug utils | ||
− | rn230brnrefseqcdf utils | ||
− | dmgenome1dmrefseq utils | ||
− | hs133bptensgcdf utils | ||
− | hs133pptentrezg utils | ||
− | mm430bmmense utils | ||
− | hgu95acdf utils | ||
− | ath1atrefseqcdf utils | ||
− | |||
− | hs133av2ptentrezgprobe matchprobes | ||
− | hs133bptentrezg utils | ||
− | hs133xhsrefseqprobe | ||
− | |||
− | hs133phsensgcdf utils | ||
− | hs133av2hsensecdf utils | ||
− | |||
− | hs95av2ptenseprobe matchprobes | ||
− | |||
− | |||
− | rn230arnentrezgprobe matchprobes | ||
− | |||
− | mm430ammentrezgprobe matchprobes | ||
− | |||
− | mm430ammenseprobe matchprobes | ||
− | |||
− | hs133aptentrezgprobe matchprobes | ||
− | hs133bhsensgcdf utils | ||
− | hs133phsentrezg utils | ||
− | mm74bv2mmense utils | ||
− | |||
− | rat2302probe matchprobes | ||
− | |||
− | |||
− | mouse4302probe matchprobes | ||
− | hs133bhsentrezg utils | ||
− | |||
− | mm430mmenstprobe matchprobes | ||
− | atgenomeattair utils | ||
− | mm430bmmensg utils | ||
− | |||
− | |||
− | drzebrafishdrugprobe matchprobes | ||
− | |||
− | ecoli2cdf utils | ||
− | |||
− | dmgenome1dmugprobe matchprobes | ||
− | dmdrosophila2dmensgcdf utils | ||
− | |||
− | |||
− | bsubtiliscdf utils | ||
− | mm74bv2mmenstcdf utils | ||
− | rn230arnrefseq utils | ||
− | |||
− | hs133av2hsrefseqprobe matchprobes | ||
− | |||
− | atgenomeatrefseq utils | ||
− | |||
− | |||
− | mm430bmmrefseqprobe matchprobes | ||
− | hs95av2ptensecdf utils | ||
− | ygs98cdf utils | ||
− | |||
− | hs133ahsenstprobe matchprobes | ||
− | mm74bv2mmensg utils | ||
− | rn230brnensgcdf utils | ||
− | hgu133plus2cdf utils | ||
− | mmex10stv1mmenstcdf utils | ||
− | |||
− | mmex10stv1mmrefseqprobe matchprobes | ||
− | |||
− | ygs98probe matchprobes | ||
− | rn230brnentrezg utils | ||
− | |||
− | hsex10stv2hsrefseqprobe matchprobes | ||
− | rn34arnenst utils | ||
− | |||
− | hs95av2hsensecdf utils | ||
− | |||
− | mm430mmrefseqprobe matchprobes | ||
− | |||
− | mm74bv2mmentrezgprobe matchprobes | ||
− | |||
− | |||
− | drzebrafishdrensgprobe matchprobes | ||
− | cfcanine2cfug utils | ||
− | rn34arnensgcdf utils | ||
− | hu35ksubccdf utils | ||
− | |||
− | mm430bmmug utils | ||
− | rn34arnentrezg utils | ||
− | mm74av1mmensgcdf utils | ||
− | |||
− | hs133av2hsentrezgprobe matchprobes | ||
− | mm430ammenst utils | ||
− | u133aaofav2cdf utils | ||
− | hsex10stv2ptensecdf utils | ||
− | ggchickenggugcdf utils | ||
− | mm74av1mmentrezg utils | ||
− | |||
− | drzebrafishdrrefseq utils | ||
− | |||
− | ecoliprobe matchprobes | ||
− | |||
− | |||
− | hs95av2hsug utils | ||
− | |||
− | porcineprobe matchprobes | ||
− | mm430ammensecdf utils | ||
− | hs133aptentrezgcdf utils | ||
− | |||
− | mm74bv2mmrefseq utils | ||
− | |||
− | hs133ahsentrezgprobe matchprobes | ||
− | |||
− | |||
− | mm430mmenseprobe matchprobes | ||
− | |||
− | ath1attigrprobe matchprobes | ||
− | rn230rnentrezgcdf utils | ||
− | hsex10stv2hsensecdf utils | ||
− | mu6500subbcdf utils | ||
− | mm74av2mmensecdf utils | ||
− | mm74av2mmentrezgcdf utils | ||
− | |||
− | rgu34bcdf utils | ||
− | |||
− | rae230aprobe matchprobes | ||
− | |||
− | sugarcaneprobe matchprobes | ||
− | |||
− | mm74bv2mmugprobe matchprobes | ||
− | saureuscdf utils | ||
− | |||
− | mgu74av2probe matchprobes | ||
− | htratfocuscdf utils | ||
− | |||
− | mm74av1mmenstprobe matchprobes | ||
− | mm430mmensecdf utils | ||
− | |||
− | dmgenome1dmensgprobe matchprobes | ||
− | drzebrafishdrentrezgcdf utils | ||
− | |||
− | mgu74ccdf utils | ||
− | mm74cv2mmugcdf utils | ||
− | hu6800subccdf utils | ||
− | |||
− | hs133ahsenseprobe matchprobes | ||
− | hs133xhsenstprobe | ||
− | |||
− | |||
− | mmex10stv1mmugprobe matchprobes | ||
− | rnex10stv1rnrefseqcdf utils | ||
− | mouse4302cdf utils | ||
− | hs133av2ptensgcdf utils | ||
− | |||
− | paeg1aprobe matchprobes | ||
− | hs133xptensecdf utils | ||
− | mu19ksubacdf utils | ||
− | hs133av2ptentrezg utils | ||
− | hgu95ccdf utils | ||
− | mm430bmmentrezgcdf utils | ||
− | |||
− | hsfocusptentrezgcdf utils | ||
− | ath1attair utils | ||
− | ggchickenggenst utils | ||
− | wheatcdf utils | ||
− | |||
− | celegansprobe matchprobes | ||
− | |||
− | hgu95cprobe matchprobes | ||
− | |||
− | vitisviniferaprobe matchprobes | ||
− | |||
− | hgu95av2probe matchprobes | ||
− | |||
− | drosgenome1probe matchprobes | ||
− | hs133av2hsensgcdf utils | ||
− | |||
− | rn230brnentrezgprobe matchprobes | ||
− | |||
− | mm430bmmentrezgprobe matchprobes | ||
− | |||
− | hs133bptentrezgprobe matchprobes | ||
− | rn230brnentrezgcdf utils | ||
− | hs133xhsensecdf utils | ||
− | |||
− | |||
− | hs133av2hsentrezg utils | ||
− | osriceosrefseqcdf utils | ||
− | hgfocuscdf utils | ||
− | test2cdf utils | ||
− | |||
− | hs133aptensgprobe matchprobes | ||
− | mmex10stv1mmugcdf utils | ||
− | |||
− | rn34arnenstprobe matchprobes | ||
− | rnex10stv1rnenst utils | ||
− | dmdrosophila2dmense utils | ||
− | mm74av1mmense utils | ||
− | |||
− | |||
− | rn230rnenst utils | ||
− | |||
− | |||
− | |||
− | mm11ksubbmmensgprobe matchprobes | ||
− | |||
− | |||
− | drzebrafishdrentrezgprobe matchprobes | ||
− | |||
− | rn34arnentrezgcdf utils | ||
− | hs95av2ptensgcdf utils | ||
− | |||
− | hsex10stv2ptentrezgprobe matchprobes | ||
− | hs133av2hsug utils | ||
− | mm74bv2mmrefseqcdf utils | ||
− | hs95av2ptentrezg utils | ||
− | |||
− | |||
− | dmgenome1dmug utils | ||
− | mgu74cv2cdf utils | ||
− | rn34arnugcdf utils | ||
− | dmdrosophila2dmensg utils | ||
− | mm74av1mmensg utils | ||
− | |||
− | mm74av1mmenseprobe matchprobes | ||
− | |||
− | hs133bhsugcdf utils | ||
− | mm430bmmenst utils | ||
− | |||
− | hs133av2hsenstprobe matchprobes | ||
− | |||
− | hs133phsensgprobe matchprobes | ||
− | hs95av2hsensgcdf utils | ||
− | mu11ksubacdf utils | ||
− | |||
− | hs133xhsenseprobe matchprobes | ||
− | |||
− | ggchickenggrefseqprobe matchprobes | ||
− | porcinecdf utils | ||
− | |||
− | |||
− | |||
− | u133x3pprobe matchprobes | ||
− | |||
− | mm11ksubbmmrefseqprobe matchprobes | ||
− | hs95av2hsentrezg utils | ||
− | |||
− | hu6800probe matchprobes | ||
− | |||
− | hs133pptenstprobe matchprobes | ||
− | |||
− | mm74bv2mmrefseqprobe matchprobes | ||
− | ath1attigrcdf utils | ||
− | mm74bv2mmenst utils | ||
− | vitisviniferacdf utils | ||
− | hsex10stv2ptensgcdf utils | ||
− | LogitBoost NONE | ||
− | |||
− | |||
− | |||
− | XML methods | ||
− | |||
− | |||
− | RMySQL methods | ||
− | RMySQL DBI | ||
− | |||
− | SSOAP methods | ||
− | SSOAP XML | ||
− | SSOAP RCurl | ||
− | RCurl methods |
Latest revision as of 13:22, 6 October 2007
This graph shows the package dependencies for the BioConductor software for the statistical analysis of microarrary data in R. The dependency list was generated from the BioConductor-1.9 software repository HTML pages.
Unfortunately it is too large to be used on this webserver (due to memory limitations). A slightly shorter list (75%) would work. See also Test graph 2 ...
{{#wgraph: png | thumb=40 | nodetype * { font helvR08 } layoutalgorithm=forcedir edge gpls NONE {} edge sigPathway R {} edge TypeInfo methods {} edge Biostrings R {} edge Biostrings methods {} edge Mfuzz R {} edge Mfuzz Biobase {} edge Mfuzz e1071 {} edge LMGene R {} edge LMGene Biobase {} edge LMGene multtest {} edge LMGene survival {} edge ecolitk R {} edge ecolitk affy {} edge ecolitk ecoliLeucine {} edge ecolitk ecolicdf {} edge ecolitk Biobase {} edge maCorrPlot NONE {} edge OLINgui R {} edge OLINgui OLIN {} edge xcms R {} edge xcms methods {} edge rflowcyt R {} edge rflowcyt survival {} edge rflowcyt xtable {} edge rflowcyt stats {} edge rflowcyt KernSmooth {} edge rflowcyt MASS {} edge rflowcyt grid {} edge rflowcyt methods {} edge rflowcyt hexbin {} edge rflowcyt rfcdmin {} edge rflowcyt fields {} edge rflowcyt lattice {} edge rflowcyt locfit {} edge daMA MASS {} edge made4 ade4 {} edge made4 scatterplot3d {} edge biomaRt methods {} edge biomaRt XML {} edge biomaRt RCurl {} edge gaggle rJava {} edge gaggle graph {} edge affylmGUI limma {} edge affylmGUI tcltk {} edge affylmGUI affy {} edge affylmGUI Biobase {} edge SAGElyzer AnnBuilder {} edge SAGElyzer tkWidgets {} edge SAGElyzer genefilter {} edge SAGElyzer annotate {} edge GeneR NONE {} edge GeneSpring Biobase {} edge GeneSpring methods {} edge geneplotter annotate {} edge geneplotter Biobase {} edge geneplotter methods {} edge BioMVCClass methods {} edge BioMVCClass MVCClass {} edge BioMVCClass Biobase {} edge BioMVCClass graph {} edge BioMVCClass Rgraphviz {} edge sizepower stats {} edge PROcess Icens {} edge snapCGH limma {} edge snapCGH tilingArray {} edge snapCGH DNAcopy {} edge snapCGH aCGH {} edge snapCGH GLAD {} edge snapCGH cluster {} edge snapCGH methods {} edge bioDist methods {} edge bioDist Biobase {} edge marray limma {} edge marray methods {} edge tkWidgets methods {} edge tkWidgets widgetTools {} edge tkWidgets DynDoc {} edge rama NONE {} edge Ruuid methods {} edge arrayQuality marray {} edge arrayQuality limma {} edge arrayQuality convert {} edge arrayQuality hexbin {} edge arrayQuality gridBase {} edge arrayQuality RColorBrewer {} edge GraphAT MCMCpack {} edge GraphAT graph {} edge beadarray limma {} edge beadarray Biobase {} edge beadarray affy {} edge beadarray methods {} edge ppiStats apComplex {} edge ppiStats GO {} edge ppiStats GOstats {} edge ppiStats YEAST {} edge ppiStats graph {} edge ppiStats Rgraphviz {} edge ppiStats Category {} edge pcaMethods MASS {} edge pcaMethods ellipse {} edge pcaMethods pls {} edge pcaMethods methods {} edge GlobalAncova methods {} edge webbioc Biobase {} edge webbioc affy {} edge webbioc multtest {} edge webbioc annaffy {} edge webbioc vsn {} edge webbioc gcrma {} edge webbioc qvalue {} edge cghMCR methods {} edge cghMCR DNAcopy {} edge cghMCR marray {} edge cghMCR arrayQuality {} edge widgetInvoke methods {} edge widgetInvoke XML {} edge widgetInvoke RGtk {} edge hexbin methods {} edge hexbin grid {} edge hexbin lattice {} edge hexbin colorspace {} edge matchprobes Biobase {} edge matchprobes affy {} edge siggenes methods {} edge siggenes multtest {} edge siggenes Biobase {} edge AnnBuilder methods {} edge AnnBuilder Biobase {} edge AnnBuilder XML {} edge AnnBuilder annotate {} edge AnnBuilder utils {} edge AnnBuilder RSQLite {} edge pamr NONE {} edge RBGL graph {} edge RBGL methods {} edge biocViews methods {} edge biocViews tools {} edge biocViews graph {} edge biocViews RBGL {} edge biocViews XML {} edge CoCiteStats humanLLMappings {} edge ChromoViz RSvgDevice {} edge ChromoViz XML {} edge GOstats graph {} edge GOstats GO {} edge GOstats annotate {} edge GOstats RBGL {} edge GOstats Biobase {} edge GOstats Category {} edge GOstats methods {} edge prada Biobase {} edge prada RColorBrewer {} edge prada grid {} edge prada methods {} edge prada geneplotter {} edge bridge rama {} edge ontoTools methods {} edge ontoTools graph {} edge ontoTools SparseM {} edge ontoTools GO {} edge ontoTools Biobase {} edge ontoTools annotate {} edge MCRestimate e1071 {} edge MCRestimate pamr {} edge MCRestimate randomForest {} edge MCRestimate RColorBrewer {} edge MCRestimate Biobase {} edge MCRestimate golubEsets {} edge aroma.light R.oo {} edge pkgDepTools methods {} edge pkgDepTools graph {} edge pkgDepTools RBGL {} edge MeasurementError.cor NONE {} edge logicFS LogicReg {} edge copa Biobase {} edge copa methods {} edge Category Biobase {} edge Category KEGG {} edge Category GO {} edge Category graph {} edge Category annotate {} edge Category methods {} edge Category genefilter {} edge Harshlight affy {} edge OrderedList Biobase {} edge OrderedList twilight {} edge MVCClass methods {} edge panp affy {} edge LPE NONE {} edge MANOR GLAD {} edge RbcBook1 Biobase {} edge vsn Biobase {} edge iSPlot methods {} edge iSPlot RGtk {} edge iSPlot gtkDevice {} edge iSPlot MVCClass {} edge pickgene MASS {} edge makecdfenv methods {} edge makecdfenv Biobase {} edge makecdfenv affy {} edge makecdfenv utils {} edge makecdfenv affyio {} edge aCGH cluster {} edge aCGH survival {} edge aCGH multtest {} edge aCGH sma {} edge KEGGSOAP methods {} edge KEGGSOAP XML {} edge KEGGSOAP SSOAP {} edge KEGGSOAP RCurl {} edge annotate methods {} edge annotate Biobase {} edge limma methods {} edge timecourse limma {} edge timecourse MASS {} edge timecourse Biobase {} edge timecourse methods {} edge nem e1071 {} edge nem graph {} edge nem Rgraphviz {} edge nem RBGL {} edge HEM Biobase {} edge SBMLR XML {} edge SBMLR odesolve {} edge MLInterfaces Biobase {} edge MLInterfaces methods {} edge MLInterfaces genefilter {} edge weaver digest {} edge weaver tools {} edge weaver utils {} edge weaver codetools {} edge goTools Biobase {} edge goTools annotate {} edge goTools GO {} edge applera Biobase {} edge applera methods {} edge applera affy {} edge applera genefilter {} edge applera limma {} edge applera geneplotter {} edge applera RColorBrewer {} edge applera prada {} edge applera combinat {} edge annaffy methods {} edge annaffy Biobase {} edge annaffy GO {} edge annaffy KEGG {} edge spotSegmentation mclust {} edge geneRecommender Biobase {} edge codelink methods {} edge codelink limma {} edge codelink annotate {} edge widgetTools methods {} edge widgetTools utils {} edge splots grid {} edge RSNPper methods {} edge RSNPper utils {} edge RSNPper tools {} edge RSNPper XML {} edge GeneMeta methods {} edge GeneMeta Biobase {} edge GeneMeta genefilter {} edge GEOquery methods {} edge globaltest methods {} edge globaltest graphics {} edge globaltest multtest {} edge pathRender graph {} edge pathRender Rgraphviz {} edge pathRender cMAP {} edge convert Biobase {} edge convert limma {} edge convert marray {} edge convert utils {} edge convert methods {} edge stam GO {} edge stam Biobase {} edge stam pamr {} edge stam cluster {} edge stam annaffy {} edge stam methods {} edge BSgenome methods {} edge BSgenome Biostrings {} edge pdmclass Biobase {} edge pdmclass fibroEset {} edge pdmclass mda {} edge cellHTS prada {} edge cellHTS RColorBrewer {} edge cellHTS Biobase {} edge cellHTS genefilter {} edge metaArray MergeMaid {} edge EBImage methods {} edge arrayQCplot RGtk2 {} edge arrayQCplot cairoDevice {} edge arrayQCplot LPE {} edge hopach cluster {} edge hopach Biobase {} edge DNAcopy NONE {} edge ssize gdata {} edge ssize xtable {} edge apComplex graph {} edge tilingArray methods {} edge tilingArray Biobase {} edge tilingArray affy {} edge tilingArray RColorBrewer {} edge tilingArray grid {} edge tilingArray strucchange {} edge tilingArray vsn {} edge tilingArray genefilter {} edge tilingArray geneplotter {} edge tilingArray pixmap {} edge RMAPPER methods {} edge splicegear methods {} edge splicegear utils {} edge splicegear grid {} edge splicegear Biobase {} edge splicegear XML {} edge splicegear annotate {} edge gff3Plotter methods {} edge mmgmos methods {} edge mmgmos Biobase {} edge mmgmos affy {} edge plgem Biobase {} edge plgem MASS {} edge DEDS methods {} edge pgUtils Rdbi {} edge pgUtils RdbiPgSQL {} edge pgUtils methods {} edge hypergraph methods {} edge hypergraph graph {} edge arrayMagic methods {} edge arrayMagic utils {} edge arrayMagic Biobase {} edge arrayMagic vsn {} edge arrayMagic limma {} edge arrayMagic genefilter {} edge nudge stats {} edge sscore affy {} edge sscore affxparser {} edge simulatorAPMS graph {} edge simulatorAPMS apComplex {} edge simulatorAPMS Rgraphviz {} edge simulatorAPMS ScISI {} edge simulatorAPMS ppiStats {} edge affy Biobase {} edge affy methods {} edge affy utils {} edge affy affyio {} edge OCplus akima {} edge OCplus multtest {} edge diffGeneAnalysis minpack.lm {} edge macat Biobase {} edge macat annotate {} edge idiogram methods {} edge idiogram Biobase {} edge idiogram annotate {} edge pcot2 grDevices {} edge pcot2 Biobase {} edge pcot2 amap {} edge iSNetwork methods {} edge iSNetwork graph {} edge iSNetwork Rgraphviz {} edge iSNetwork RGtk {} edge iSNetwork gtkDevice {} edge iSNetwork BioMVCClass {} edge iSNetwork MVCClass {} edge iSNetwork Biobase {} edge iSNetwork annotate {} edge affyPLM affy {} edge affyPLM affydata {} edge affyPLM Biobase {} edge affyPLM methods {} edge affyPLM gcrma {} edge spikeLI utils {} edge genefilter methods {} edge genefilter Biobase {} edge genefilter survival {} edge altcdfenvs methods {} edge altcdfenvs Biobase {} edge altcdfenvs affy {} edge altcdfenvs matchprobes {} edge altcdfenvs makecdfenv {} edge OLIN methods {} edge OLIN stats {} edge OLIN locfit {} edge OLIN Biobase {} edge OLIN marray {} edge beadarraySNP methods {} edge beadarraySNP Biobase {} edge beadarraySNP limma {} edge beadarraySNP quantsmooth {} edge Heatplus NONE {} edge GeneTS GeneCycle {} edge GeneTS GeneNet {} edge safe methods {} edge safe Biobase {} edge Rgraphviz methods {} edge Rgraphviz graph {} edge Rgraphviz geneplotter {} edge RdbiPgSQL Rdbi {} edge twilight splines {} edge twilight stats {} edge GeneTraffic Biobase {} edge GeneTraffic affy {} edge GeneTraffic marray {} edge GeneTraffic SSOAP {} edge GeneTraffic XML {} edge GeneTraffic digest {} edge GeneTraffic methods {} edge simpleaffy affy {} edge simpleaffy genefilter {} edge maSigPro Biobase {} edge Icens survival {} edge Rredland methods {} edge Rredland graph {} edge graph methods {} edge nnNorm nnet {} edge nnNorm marray {} edge genArise locfit {} edge genArise tkrplot {} edge genArise xtable {} edge genArise methods {} edge EBarrays Biobase {} edge EBarrays methods {} edge EBarrays utils {} edge EBarrays lattice {} edge reb Biobase {} edge reb idiogram {} edge SAGx stats {} edge SAGx multtest {} edge SAGx sma {} edge SAGx methods {} edge RMAGEML marray {} edge RMAGEML limma {} edge RMAGEML Biobase {} edge affyio methods {} edge edd methods {} edge edd golubEsets {} edge edd Biobase {} edge edd class {} edge edd nnet {} edge edd xtable {} edge maDB Biobase {} edge maDB affy {} edge maDB limma {} edge maDB methods {} edge DynDoc methods {} edge DynDoc tools {} edge BeadExplorer methods {} edge BeadExplorer widgetTools {} edge BeadExplorer affy {} edge BeadExplorer R2HTML {} edge BeadExplorer grDevices {} edge BeadExplorer tkWidgets {} edge affycoretools affy {} edge affycoretools limma {} edge affycoretools GOstats {} edge affycoretools biomaRt {} edge limmaGUI limma {} edge limmaGUI tcltk {} edge ABarray Biobase {} edge ABarray multtest {} edge GGtools methods {} edge GGtools Biobase {} edge GGtools hgfocus {} edge GGtools geneplotter {} edge Biobase tools {} edge Biobase methods {} edge Biobase utils {} edge factDesign Biobase {} edge factDesign affy {} edge factDesign stats {} edge sagenhaft SparseM {} edge ROC utils {} edge ROC methods {} edge bim stats {} edge bim qtl {} edge gcrma Biobase {} edge gcrma affy {} edge gcrma matchprobes {} edge gcrma splines {} edge adSplit methods {} edge adSplit stats {} edge adSplit cluster {} edge adSplit multtest {} edge adSplit Biobase {} edge adSplit affy {} edge adSplit GO {} edge adSplit KEGG {} edge Resourcerer AnnBuilder {} edge MergeMaid survival {} edge MergeMaid Biobase {} edge MergeMaid MASS {} edge MergeMaid methods {} edge plier affy {} edge quantsmooth quantreg {} edge quantsmooth lodplot {} edge affycomp Biobase {} edge stepNorm marray {} edge stepNorm MASS {} edge stepNorm methods {} edge clusterStab Biobase {} edge clusterStab methods {} edge affyQCReport Biobase {} edge affyQCReport affy {} edge affyQCReport simpleaffy {} edge affypdnn affy {} edge affypdnn affydata {} edge affypdnn hgu95av2probe {} edge affydata affy {} edge pairseqsim methods {} edge pairseqsim stats {} edge fdrame NONE {} edge ScISI methods {} edge ScISI apComplex {} edge ScISI GO {} edge ScISI GOstats {} edge ScISI graph {} edge ScISI RBGL {} edge ScISI Rgraphviz {} edge ScISI YEAST {} edge ScISI xtable {} edge multtest methods {} edge multtest Biobase {} edge multtest survival {} edge ctc NONE {} edge yeastExpData graph {} edge golubEsets Biobase {} edge estrogen affy {} edge MAQCsubset Biobase {} edge fibroEset Biobase {} edge HEEBOdata NONE {} edge facsDorit prada {} edge Iyer517 Biobase {} edge stjudem utils {} edge ProData Biobase {} edge SpikeIn affy {} edge ALL Biobase {} edge AmpAffyExample affy {} edge kidpack Biobase {} edge CLL affy {} edge CLL Biobase {} edge SpikeInSubset Biobase {} edge SpikeInSubset affy {} edge gaschYHS Biobase {} edge ALLMLL affy {} edge bronchialIL13 affy {} edge beta7 marray {} edge lungExpression Biobase {} edge HIVcDNAvantWout03 NONE {} edge yeastCC Biobase {} edge harbChIP Biobase {} edge ppiData Rgraphviz {} edge ppiData graph {} edge colonCA Biobase {} edge SNAData graph {} edge ecoliLeucine affy {} edge davidTiling Biobase {} edge davidTiling tilingArray {} edge davidTiling GO {} edge MEEBOdata NONE {} edge GGdata Biobase {} edge GGdata hgfocus {} edge rn230rnentrezgprobe matchprobes {} edge rn230brnrefseqprobe matchprobes {} edge dmgenome1dmense utils {} edge medicagoprobe matchprobes {} edge dmgenome1dmugcdf utils {} edge hsex10stv2ptentrezg utils {} edge caninecdf utils {} edge mm430ammensgcdf utils {} edge mm430ammrefseqcdf utils {} edge hsfocushsenstprobe matchprobes {} edge hs133bhsentrezgprobe matchprobes {} edge drzebrafishdrugcdf utils {} edge mm430ammentrezg utils {} edge hgu133bprobe matchprobes {} edge mmex10stv1mmentrezgprobe matchprobes {} edge rn34arnenseprobe matchprobes {} edge soybeancdf utils {} edge hs133xptensgprobe matchprobes {} edge rtu34probe matchprobes {} edge hsex10stv2hsensgcdf utils {} edge rnex10stv1rnensecdf utils {} edge mm11ksubbmmentrezgcdf utils {} edge mu6500subdcdf utils {} edge mm74av2mmensgcdf utils {} edge mm74bv2mmentrezgcdf utils {} edge rn230rnenstprobe matchprobes {} edge hs95av2hsrefseq utils {} edge hsex10stv2hsentrezg utils {} edge mm430bmmenstprobe matchprobes {} edge hsex10stv2hsense utils {} edge mm74av2mmentrezg utils {} edge BSgenome.Dmelanogaster.BDGP.Release5 methods {} edge BSgenome.Dmelanogaster.BDGP.Release5 Biostrings {} edge BSgenome.Dmelanogaster.BDGP.Release5 BSgenome {} edge dmgenome1dmensg utils {} edge mm430bmmensecdf utils {} edge mm430mmensgcdf utils {} edge hu35ksubaprobe matchprobes {} edge rn230brnensgprobe matchprobes {} edge hsex10stv2ptense utils {} edge osriceostigrprobe matchprobes {} edge hsex10stv2hsentrezgprobe matchprobes {} edge cfcanine2cfenstprobe matchprobes {} edge mm430mmentrezg utils {} edge mm74av1mmrefseqprobe matchprobes {} edge rnex10stv1rnrefseq utils {} edge atgenomeattaircdf utils {} edge hs133xptensgcdf utils {} edge mu19ksubccdf utils {} edge hgu95ecdf utils {} edge atgenomeatrefseqcdf utils {} edge hs133phsrefseqprobe matchprobes {} edge hsex10stv2hsensg utils {} edge hs133xptentrezg utils {} edge saureusprobe matchprobes {} edge hs133av2hsenseprobe matchprobes {} edge rhesusprobe matchprobes {} edge mm74av2mmense utils {} edge mm11ksubammenstcdf utils {} edge mmex10stv1mmrefseq utils {} edge cfcanine2cfentrezgcdf utils {} edge ggchickenggenstprobe matchprobes {} edge cyp450cdf utils {} edge hsex10stv2ptensg utils {} edge hs133pptenseprobe matchprobes {} edge hs133xhsensgcdf utils {} edge poplarcdf utils {} edge dmdrosophila2dmrefseqprobe matchprobes {} edge hs95av2hsrefseqprobe matchprobes {} edge hs133xhsentrezg utils {} edge mm11ksubammugcdf utils {} edge mm74av2mmensg utils {} edge hsex10stv2hsenstprobe matchprobes {} edge mgu74cprobe matchprobes {} edge hsfocushsenseprobe matchprobes {} edge hs133bhsentrezgcdf utils {} edge mmex10stv1mmense utils {} edge mm11ksubammenstprobe matchprobes {} edge hs133av2ptensgprobe matchprobes {} edge drzebrafishdrense utils {} edge mm430mmrefseqcdf utils {} edge cfcanine2cfenstcdf utils {} edge hs133aptenstcdf utils {} edge rn230rnenseprobe matchprobes {} edge mm430bmmenseprobe matchprobes {} edge mm74av1mmug utils {} edge bovinecdf utils {} edge drzebrafishdrensecdf utils {} edge dmgenome1dmensecdf utils {} edge rae230bcdf utils {} edge hu6800cdf utils {} edge ath1attairprobe matchprobes {} edge canineprobe matchprobes {} edge mmex10stv1mmensg utils {} edge hs133ahsrefseqcdf utils {} edge cfcanine2cfenseprobe matchprobes {} edge rnex10stv1rnugcdf utils {} edge mm74av2mmrefseq utils {} edge hs133ahsenstcdf utils {} edge mm430mmrefseq utils {} edge drzebrafishdrensg utils {} edge ggchickenggenstcdf utils {} edge mm74cv2mmenstcdf utils {} edge hsfocusptensgprobe matchprobes {} edge BSgenome.Dmelanogaster.UCSC.dm2 methods {} edge BSgenome.Dmelanogaster.UCSC.dm2 Biostrings {} edge BSgenome.Dmelanogaster.UCSC.dm2 BSgenome {} edge hs133bhsenstprobe matchprobes {} edge mm11ksubammugprobe matchprobes {} edge ggchickenggenseprobe matchprobes {} edge mm430mmense utils {} edge mm74cv2mmenstprobe matchprobes {} edge dmdrosophila2dmenst utils {} edge tomatocdf utils {} edge mm74av1mmenst utils {} edge mgu74bv2probe matchprobes {} edge rn230arnenstcdf utils {} edge hgu133acdf utils {} edge BSgenome.Hsapiens.UCSC.hg16 methods {} edge BSgenome.Hsapiens.UCSC.hg16 Biostrings {} edge BSgenome.Hsapiens.UCSC.hg16 BSgenome {} edge hs95av2hsenstprobe matchprobes {} edge atgenomeattigrprobe matchprobes {} edge cfcanine2cfense utils {} edge rnex10stv1rnensgcdf utils {} edge mm74cv2mmentrezgcdf utils {} edge hs133ahsense utils {} edge dmdrosophila2dmenstprobe matchprobes {} edge hsex10stv2hsenseprobe matchprobes {} edge hsfocusptentrezgprobe matchprobes {} edge rnex10stv1rnentrezg utils {} edge BSgenome.Hsapiens.UCSC.hg17 methods {} edge BSgenome.Hsapiens.UCSC.hg17 Biostrings {} edge BSgenome.Hsapiens.UCSC.hg17 BSgenome {} edge moe430bcdf utils {} edge rnex10stv1rnensgprobe matchprobes {} edge mm430mmentrezgprobe matchprobes {} edge ye6100subacdf utils {} edge mm430mmensg utils {} edge hs133xhsug utils {} edge mm11ksubammenseprobe matchprobes {} edge chickencdf utils {} edge mm430bmmensgcdf utils {} edge hs133aptense utils {} edge rn230rnenstcdf utils {} edge rn230arnenstprobe matchprobes {} edge cfcanine2cfrefseq utils {} edge mm430bmmentrezg utils {} edge BSgenome.Scerevisiae.UCSC.sacCer1 methods {} edge BSgenome.Scerevisiae.UCSC.sacCer1 Biostrings {} edge BSgenome.Scerevisiae.UCSC.sacCer1 BSgenome {} edge cfcanine2cfugprobe matchprobes {} edge BSgenome.Hsapiens.UCSC.hg18 methods {} edge BSgenome.Hsapiens.UCSC.hg18 Biostrings {} edge BSgenome.Hsapiens.UCSC.hg18 BSgenome {} edge hs133phsug utils {} edge zebrafishcdf utils {} edge rat2302cdf utils {} edge moe430bprobe matchprobes {} edge rn230rnugcdf utils {} edge cfcanine2cfensg utils {} edge hgu95bprobe matchprobes {} edge yeast2cdf utils {} edge hgu133plus2probe matchprobes {} edge hs133ahsensg utils {} edge mm74av1mmrefseqcdf utils {} edge mmex10stv1mmenstprobe matchprobes {} edge hsfocusptenstcdf utils {} edge mm74bv2mmensecdf utils {} edge rn230brnug utils {} edge hs133xhsrefseqcdf utils {} edge hs133aptensg utils {} edge hgu133a2probe matchprobes {} edge citrusprobe matchprobes {} edge hs133ahsugprobe matchprobes {} edge hsex10stv2ptensgprobe matchprobes {} edge ggchickenggugprobe matchprobes {} edge mm74cv2mmugprobe matchprobes {} edge dmgenome1dmenst utils {} edge rn34arnentrezgprobe matchprobes {} edge mm74av2mmenstprobe matchprobes {} edge BSgenome.Celegans.UCSC.ce2 methods {} edge BSgenome.Celegans.UCSC.ce2 Biostrings {} edge BSgenome.Celegans.UCSC.ce2 BSgenome {} edge mmex10stv1mmensecdf utils {} edge hs133bhsenseprobe matchprobes {} edge hsfocushsenstcdf utils {} edge mm74cv2mmentrezgprobe matchprobes {} edge mm11ksubbmmenstcdf utils {} edge mm74cv2mmenseprobe matchprobes {} edge hs133xhsense utils {} edge dmdrosophila2dmug utils {} edge mm74bv2mmensgprobe matchprobes {} edge rgu34cprobe matchprobes {} edge rn230arnugprobe matchprobes {} edge hs133xptense utils {} edge hsex10stv2hsenst utils {} edge hs95av2hsenseprobe matchprobes {} edge mgu74bv2cdf utils {} edge rn34arnrefseqcdf utils {} edge hsex10stv2ptenst utils {} edge dmdrosophila2dmenseprobe matchprobes {} edge hthgu133acdf utils {} edge agprobe matchprobes {} edge hsfocushsentrezgprobe matchprobes {} edge hs133xhsensg utils {} edge drzebrafishdrensgcdf utils {} edge dmgenome1dmensgcdf utils {} edge hu35ksubdprobe matchprobes {} edge hs133bptensgprobe matchprobes {} edge rn230rnugprobe matchprobes {} edge maizeprobe matchprobes {} edge rn230arnenseprobe matchprobes {} edge drzebrafishdrentrezg utils {} edge hs133xptensg utils {} edge hs133pptenstcdf utils {} edge mm74av2mmenst utils {} edge vvgrapevvtigrprobe matchprobes {} edge hsex10stv2hsugcdf utils {} edge hs133bptenstcdf utils {} edge paeg1acdf utils {} edge mm11ksubammug utils {} edge mm430ammugcdf utils {} edge ggchickenggrefseq utils {} edge hs95av2ptensgprobe matchprobes {} edge hs133av2hsrefseqcdf utils {} edge mmex10stv1mmenseprobe matchprobes {} edge mm430ammensgprobe matchprobes {} edge hs133ahsrefseqprobe matchprobes {} edge hs133bhsense utils {} edge hs133phsenstcdf utils {} edge hs133bptentrezgcdf utils {} edge hgu133aprobe matchprobes {} edge hs133bhsenstcdf utils {} edge dmdrosophila2dmrefseq utils {} edge hs133bptense utils {} edge mm74av2mmenseprobe matchprobes {} edge mm11ksubammense utils {} edge hu35ksubbcdf utils {} edge mmex10stv1mmenst utils {} edge dmdrosophila2dmenstcdf utils {} edge hsfocushsugprobe matchprobes {} edge atgenomeattigr utils {} edge hgu133atagcdf utils {} edge mm11ksubbmmugprobe matchprobes {} edge drzebrafishdrenst utils {} edge hgu133a2cdf utils {} edge drzebrafishdrenstprobe matchprobes {} edge hs133phsentrezgcdf utils {} edge hs95av2hsugcdf utils {} edge hs133bhsensg utils {} edge hs95av2hsentrezgcdf utils {} edge ye6100subccdf utils {} edge rn34arnrefseqprobe matchprobes {} edge hsfocushsrefseqcdf utils {} edge hsex10stv2hsug utils {} edge rn230brnenstcdf utils {} edge hs133phsense utils {} edge hs133bptensg utils {} edge mm11ksubammensg utils {} edge rn230rnrefseqcdf utils {} edge mu6500subacdf utils {} edge hs133pptense utils {} edge tomatoprobe matchprobes {} edge rgu34acdf utils {} edge mm430bmmrefseqcdf utils {} edge osriceosrefseqprobe matchprobes {} edge dmdrosophila2dmugcdf utils {} edge bovineprobe matchprobes {} edge hgu95av2cdf utils {} edge mm74bv2mmensgcdf utils {} edge mm11ksubbmmugcdf utils {} edge mgu74bcdf utils {} edge mm74av1mmugcdf utils {} edge cfcanine2cfrefseqcdf utils {} edge hu6800subbcdf utils {} edge hs133phsensg utils {} edge rn34arnenstcdf utils {} edge mm74bv2mmentrezg utils {} edge mm74av1mmentrezgprobe matchprobes {} edge mm430mmenst utils {} edge hsfocushsugcdf utils {} edge test3probe matchprobes {} edge soybeanprobe matchprobes {} edge mmex10stv1mmensgcdf utils {} edge hs133pptensg utils {} edge mm74av1mmenstcdf utils {} edge dmgenome1dmenstprobe matchprobes {} edge hgu95bcdf utils {} edge mgu74bprobe matchprobes {} edge mmex10stv1mmentrezg utils {} edge hs133xhsugcdf utils {} edge hs133phsugprobe matchprobes {} edge ggchickenggrefseqcdf utils {} edge cfcanine2cfenst utils {} edge mm430ammrefseqprobe matchprobes {} edge mm74av2mmug utils {} edge mm430mmensgprobe matchprobes {} edge hs133phsugcdf utils {} edge hs133bhsugprobe matchprobes {} edge hs133ahsenst utils {} edge rnex10stv1rnentrezgcdf utils {} edge hs133ahsug utils {} edge dmdrosophila2dmugprobe matchprobes {} edge mm11ksubbmmrefseq utils {} edge hs133aptenst utils {} edge hs133av2hsentrezgcdf utils {} edge test1cdf utils {} edge rn230arnugcdf utils {} edge maizecdf utils {} edge plasmodiumanophelesprobe matchprobes {} edge drzebrafishdrenseprobe matchprobes {} edge hs133ahsensgprobe matchprobes {} edge hsex10stv2hsrefseqcdf utils {} edge rn34arnrefseq utils {} edge mm74av1mmrefseq utils {} edge gp53cdf utils {} edge mm11ksubammrefseqcdf utils {} edge ecoliasv2probe matchprobes {} edge rn230brnugprobe matchprobes {} edge hs133aptenstprobe matchprobes {} edge atgenomeattairprobe matchprobes {} edge hs133av2ptenstcdf utils {} edge mgu74cv2probe matchprobes {} edge hs95av2hsense utils {} edge ggchickenggug utils {} edge hgu95eprobe matchprobes {} edge hs133pptentrezgprobe matchprobes {} edge canine2probe matchprobes {} edge mm11ksubbmmense utils {} edge hsfocushsense utils {} edge mm11ksubbmmenstprobe matchprobes {} edge rn230arnense utils {} edge hs95av2ptense utils {} edge ath1attigr utils {} edge yeast2probe matchprobes {} edge mm430bmmrefseq utils {} edge hsfocusptense utils {} edge hs133av2hsenstcdf utils {} edge agcdf utils {} edge rn34arnugprobe matchprobes {} edge hs133xhsenst utils {} edge hs95av2hsensg utils {} edge hu35ksubdcdf utils {} edge mm74av1mmugprobe matchprobes {} edge dmgenome1dmenseprobe matchprobes {} edge mm11ksubbmmensg utils {} edge hs133xptenst utils {} edge hsfocushsensg utils {} edge cfcanine2cfrefseqprobe matchprobes {} edge hs133phsenstprobe matchprobes {} edge hs133bhsrefseqcdf utils {} edge rn230arnensg utils {} edge hs95av2ptensg utils {} edge mm430mmug utils {} edge mm74cv2mmrefseqcdf utils {} edge ath1121501cdf utils {} edge hsfocusptensg utils {} edge ricecdf utils {} edge mm11ksubammensecdf utils {} edge wheatprobe matchprobes {} edge hs133av2hsugcdf utils {} edge drosophila2cdf utils {} edge moe430aprobe matchprobes {} edge hs95av2ptenstcdf utils {} edge hs95av2hsrefseqcdf utils {} edge hgu95aprobe matchprobes {} edge atgenomeattigrcdf utils {} edge barley1probe matchprobes {} edge mm74av1mmensgprobe matchprobes {} edge mu6500subccdf utils {} edge dmdrosophila2dmrefseqcdf utils {} edge dmgenome1dmrefseqprobe matchprobes {} edge rgu34ccdf utils {} edge hs133xhsensgprobe matchprobes {} edge hsfocushsrefseq utils {} edge hcg110probe matchprobes {} edge hs95av2hsenstcdf utils {} edge mm430mmentrezgcdf utils {} edge hs133bhsrefseq utils {} edge hs133aptenseprobe matchprobes {} edge rn230rnrefseqprobe matchprobes {} edge hs133xptenstprobe matchprobes {} edge BSgenome.Mmusculus.UCSC.mm7 methods {} edge BSgenome.Mmusculus.UCSC.mm7 Biostrings {} edge BSgenome.Mmusculus.UCSC.mm7 BSgenome {} edge mu11ksubbprobe matchprobes {} edge rn230arnrefseqcdf utils {} edge osriceosrefseq utils {} edge hu6800subdcdf utils {} edge mm74bv2mmug utils {} edge ecoliasv2cdf utils {} edge hs133bhsenst utils {} edge mm74av2mmentrezgprobe matchprobes {} edge hivprtplus2cdf utils {} edge hs133phsentrezgprobe matchprobes {} edge mm11ksubbmmenseprobe matchprobes {} edge cfcanine2cfensecdf utils {} edge hs133xptentrezgprobe matchprobes {} edge mm74av1mmentrezgcdf utils {} edge hs133aptensecdf utils {} edge hs133bptenst utils {} edge mu19ksubbcdf utils {} edge rn230brnenstprobe matchprobes {} edge mm11ksubammenst utils {} edge hsex10stv2ptenstcdf utils {} edge hgu95dcdf utils {} edge mmex10stv1mmrefseqcdf utils {} edge mm74cv2mmrefseqprobe matchprobes {} edge rgu34bprobe matchprobes {} edge hs133av2hsugprobe matchprobes {} edge drzebrafishdrug utils {} edge hs133pptentrezgcdf utils {} edge hs95av2ptentrezgcdf utils {} edge mm430mmugcdf utils {} edge mm430ammenstcdf utils {} edge rn34arnensgprobe matchprobes {} edge mgu74av2cdf utils {} edge ath1121501probe matchprobes {} edge rn230rnug utils {} edge osriceostigr utils {} edge citruscdf utils {} edge mm74av2mmrefseqcdf utils {} edge hs133av2hsense utils {} edge hs133ahsensecdf utils {} edge hs133phsenseprobe matchprobes {} edge hsex10stv2hsenstcdf utils {} edge ggchickenggensecdf utils {} edge mm74av2mmenstcdf utils {} edge mm74cv2mmensecdf utils {} edge test3cdf utils {} edge ath1atrefseq utils {} edge hs133av2ptense utils {} edge hs133phsenst utils {} edge mm74av2mmrefseqprobe matchprobes {} edge mm430ammentrezgcdf utils {} edge hu35ksubcprobe matchprobes {} edge rn230brnense utils {} edge hs133pptenst utils {} edge mm11ksubbmmug utils {} edge mm430bmmugcdf utils {} edge mm430mmenstcdf utils {} edge mm11ksubammrefseqprobe matchprobes {} edge chickenprobe matchprobes {} edge hs133av2hsensg utils {} edge rn230arnentrezgcdf utils {} edge atgenomeatrefseqprobe matchprobes {} edge poplarprobe matchprobes {} edge rn230arnensecdf utils {} edge hs133av2hsensgprobe matchprobes {} edge plasmodiumanophelescdf utils {} edge hs133xptenstcdf utils {} edge hs133av2ptensg utils {} edge bsubtilisprobe matchprobes {} edge rn230arnrefseqprobe matchprobes {} edge hs95av2hsugprobe matchprobes {} edge hs133av2ptenstprobe matchprobes {} edge mm74cv2mmense utils {} edge hs133pptensgprobe matchprobes {} edge rn230brnensg utils {} edge hs133xptenseprobe matchprobes {} edge rae230acdf utils {} edge mu11ksubbcdf utils {} edge hs133xhsentrezgcdf utils {} edge mouse430a2cdf utils {} edge hgfocusprobe matchprobes {} edge hs133xhsenstcdf utils {} edge drosgenome1cdf utils {} edge hsex10stv2hsentrezgcdf utils {} edge rn230rnensecdf utils {} edge rn230brnrefseq utils {} edge cfcanine2cfentrezgprobe matchprobes {} edge hs133av2ptentrezgcdf utils {} edge hs133xhsentrezgprobe matchprobes {} edge rn230brnenseprobe matchprobes {} edge hsfocushsensgprobe matchprobes {} edge hs133av2hsrefseq utils {} edge mm74cv2mmensg utils {} edge mm430ammugprobe matchprobes {} edge hsfocusptenstprobe matchprobes {} edge mm11ksubammensgcdf utils {} edge hsfocusptensecdf utils {} edge hsex10stv2hsrefseq utils {} edge rn230rnensgprobe matchprobes {} edge hs133xhsrefseq utils {} edge mm430bmmensgprobe matchprobes {} edge mm11ksubammentrezg utils {} edge hsex10stv2hsugprobe matchprobes {} edge ath1atrefseqprobe matchprobes {} edge mm74av2mmugprobe matchprobes {} edge mm74av2mmugcdf utils {} edge rnu34cdf utils {} edge mm74cv2mmug utils {} edge osriceostigrcdf utils {} edge mm11ksubammentrezgprobe matchprobes {} edge mmex10stv1mmug utils {} edge hs95av2ptentrezgprobe matchprobes {} edge drzebrafishdrrefseqcdf utils {} edge cfcanine2cfensgprobe matchprobes {} edge hs95av2hsenst utils {} edge hsfocushsensecdf utils {} edge ath1attaircdf utils {} edge mm430mmugprobe matchprobes {} edge mm11ksubbmmenst utils {} edge moe430acdf utils {} edge hsfocushsenst utils {} edge mm11ksubbmmensecdf utils {} edge rn230arnenst utils {} edge hs95av2ptenst utils {} edge hsfocusptenst utils {} edge mm430ammug utils {} edge mgu74aprobe matchprobes {} edge rnex10stv1rnenstprobe matchprobes {} edge ggchickenggensgprobe matchprobes {} edge hs133bhsug utils {} edge mm11ksubammentrezgcdf utils {} edge cfcanine2cfensgcdf utils {} edge hs133av2ptenseprobe matchprobes {} edge hs133aptensgcdf utils {} edge cfcanine2cfentrezg utils {} edge rn230brnugcdf utils {} edge hs133aptentrezg utils {} edge mm11ksubammrefseq utils {} edge rae230bprobe matchprobes {} edge mouse430a2probe matchprobes {} edge hs133xhsugprobe matchprobes {} edge mm74cv2mmrefseq utils {} edge hgu133atagprobe matchprobes {} edge hs133pptensecdf utils {} edge hsex10stv2hsensgprobe matchprobes {} edge rn34arnense utils {} edge hs133ahsensgcdf utils {} edge dmgenome1dmrefseqcdf utils {} edge rnex10stv1rnenstcdf utils {} edge ggchickenggensgcdf utils {} edge mm74cv2mmensgcdf utils {} edge hs133bptensecdf utils {} edge rnex10stv1rnug utils {} edge drzebrafishdrrefseqprobe matchprobes {} edge mm11ksubammensgprobe matchprobes {} edge hs133ahsentrezg utils {} edge hs133phsrefseq utils {} edge riceprobe matchprobes {} edge mm74cv2mmentrezg utils {} edge hsex10stv2ptenstprobe matchprobes {} edge hsfocusptenseprobe matchprobes {} edge mm430bmmenstcdf utils {} edge barley1cdf utils {} edge hs133phsensecdf utils {} edge hgu95dprobe matchprobes {} edge celeganscdf utils {} edge hs133bhsensecdf utils {} edge rn34arnensg utils {} edge mm430ammense utils {} edge mm430ammrefseq utils {} edge rn230arnensgcdf utils {} edge hs95av2hsentrezgprobe matchprobes {} edge dmdrosophila2dmensecdf utils {} edge rn230arnentrezg utils {} edge mm74bv2mmenstprobe matchprobes {} edge ecoli2probe matchprobes {} edge cfcanine2cfugcdf utils {} edge hs133ahsentrezgcdf utils {} edge hs133bhsensgprobe matchprobes {} edge rn230brnensecdf utils {} edge rn230rnensgcdf utils {} edge rnex10stv1rnenseprobe matchprobes {} edge mm430ammensg utils {} edge mm74cv2mmensgprobe matchprobes {} edge mm11ksubbmmrefseqcdf utils {} edge PFAM RSQLite {} edge rn230rnentrezg utils {} edge hs133bptenstprobe matchprobes {} edge hs133av2hsenst utils {} edge drosophila2probe matchprobes {} edge u133x3pcdf utils {} edge hs95av2hsensgprobe matchprobes {} edge hs133av2ptenst utils {} edge sugarcanecdf utils {} edge medicagocdf utils {} edge rtu34cdf utils {} edge hsfocusptensgcdf utils {} edge dmdrosophila2dmensgprobe matchprobes {} edge rn230brnenst utils {} edge rnex10stv1rnrefseqprobe matchprobes {} edge hs95av2ptenstprobe matchprobes {} edge hsfocusptentrezg utils {} edge rnex10stv1rnugprobe matchprobes {} edge mm430ammenstprobe matchprobes {} edge hgu133bcdf utils {} edge rn34arnensecdf utils {} edge hu35ksubacdf utils {} edge hs133phsrefseqcdf utils {} edge ggchickenggense utils {} edge xenopuslaevisprobe matchprobes {} edge hcg110cdf utils {} edge hs133ahsrefseq utils {} edge mm11ksubbmmentrezgprobe matchprobes {} edge hsex10stv2ptenseprobe matchprobes {} edge mm74av1mmensecdf utils {} edge rn230arnensgprobe matchprobes {} edge rn230rnrefseq utils {} edge hs133ahsugcdf utils {} edge hsfocushsentrezgcdf utils {} edge mu11ksubaprobe matchprobes {} edge drzebrafishdrenstcdf utils {} edge dmgenome1dmenstcdf utils {} edge mm430bmmugprobe matchprobes {} edge hsfocushsensgcdf utils {} edge mm11ksubbmmensgcdf utils {} edge ye6100subbcdf utils {} edge mmex10stv1mmentrezgcdf utils {} edge hsfocushsentrezg utils {} edge canine2cdf utils {} edge hs133xptentrezgcdf utils {} edge hs133bhsrefseqprobe matchprobes {} edge mm74cv2mmenst utils {} edge mm11ksubbmmentrezg utils {} edge ecolicdf utils {} edge mm74bv2mmugcdf utils {} edge hsex10stv2ptentrezgcdf utils {} edge rnex10stv1rnense utils {} edge vvgrapevvtigrcdf utils {} edge mmex10stv1mmensgprobe matchprobes {} edge ggchickenggensg utils {} edge rnex10stv1rnentrezgprobe matchprobes {} edge hsfocushsug utils {} edge rn230rnense utils {} edge mm74bv2mmenseprobe matchprobes {} edge rgu34aprobe matchprobes {} edge vvgrapevvtigr utils {} edge mm74av2mmensgprobe matchprobes {} edge rhesuscdf utils {} edge zebrafishprobe matchprobes {} edge hsfocushsrefseqprobe matchprobes {} edge mgu74acdf utils {} edge hu6800subacdf utils {} edge rnex10stv1rnensg utils {} edge hs133pptensgcdf utils {} edge hs133av2ptensecdf utils {} edge hu35ksubbprobe matchprobes {} edge rnu34probe matchprobes {} edge xenopuslaeviscdf utils {} edge hs133bptenseprobe matchprobes {} edge rn230rnensg utils {} edge rn34arnug utils {} edge rn230brnrefseqcdf utils {} edge dmgenome1dmrefseq utils {} edge hs133bptensgcdf utils {} edge hs133pptentrezg utils {} edge mm430bmmense utils {} edge hgu95acdf utils {} edge ath1atrefseqcdf utils {} edge hs133av2ptentrezgprobe matchprobes {} edge hs133bptentrezg utils {} edge hs133xhsrefseqprobe matchprobes {} edge hs133phsensgcdf utils {} edge hs133av2hsensecdf utils {} edge hs95av2ptenseprobe matchprobes {} edge rn230arnentrezgprobe matchprobes {} edge mm430ammentrezgprobe matchprobes {} edge mm430ammenseprobe matchprobes {} edge hs133aptentrezgprobe matchprobes {} edge hs133bhsensgcdf utils {} edge hs133phsentrezg utils {} edge mm74bv2mmense utils {} edge rat2302probe matchprobes {} edge mouse4302probe matchprobes {} edge hs133bhsentrezg utils {} edge mm430mmenstprobe matchprobes {} edge atgenomeattair utils {} edge mm430bmmensg utils {} edge drzebrafishdrugprobe matchprobes {} edge ecoli2cdf utils {} edge dmgenome1dmugprobe matchprobes {} edge dmdrosophila2dmensgcdf utils {} edge bsubtiliscdf utils {} edge mm74bv2mmenstcdf utils {} edge rn230arnrefseq utils {} edge hs133av2hsrefseqprobe matchprobes {} edge atgenomeatrefseq utils {} edge mm430bmmrefseqprobe matchprobes {} edge hs95av2ptensecdf utils {} edge ygs98cdf utils {} edge hs133ahsenstprobe matchprobes {} edge mm74bv2mmensg utils {} edge rn230brnensgcdf utils {} edge hgu133plus2cdf utils {} edge mmex10stv1mmenstcdf utils {} edge mmex10stv1mmrefseqprobe matchprobes {} edge ygs98probe matchprobes {} edge rn230brnentrezg utils {} edge hsex10stv2hsrefseqprobe matchprobes {} edge rn34arnenst utils {} edge hs95av2hsensecdf utils {} edge mm430mmrefseqprobe matchprobes {} edge mm74bv2mmentrezgprobe matchprobes {} edge drzebrafishdrensgprobe matchprobes {} edge cfcanine2cfug utils {} edge rn34arnensgcdf utils {} edge hu35ksubccdf utils {} edge mm430bmmug utils {} edge rn34arnentrezg utils {} edge mm74av1mmensgcdf utils {} edge hs133av2hsentrezgprobe matchprobes {} edge mm430ammenst utils {} edge u133aaofav2cdf utils {} edge hsex10stv2ptensecdf utils {} edge ggchickenggugcdf utils {} edge mm74av1mmentrezg utils {} edge drzebrafishdrrefseq utils {} edge ecoliprobe matchprobes {} edge ye6100subdcdf utils {} edge hs95av2hsug utils {} edge porcineprobe matchprobes {} edge mm430ammensecdf utils {} edge hs133aptentrezgcdf utils {} edge mm74bv2mmrefseq utils {} edge hs133ahsentrezgprobe matchprobes {} edge mm430mmenseprobe matchprobes {} edge ath1attigrprobe matchprobes {} edge rn230rnentrezgcdf utils {} edge hsex10stv2hsensecdf utils {} edge mu6500subbcdf utils {} edge mm74av2mmensecdf utils {} edge mm74av2mmentrezgcdf utils {} edge rgu34bcdf utils {} edge rae230aprobe matchprobes {} edge sugarcaneprobe matchprobes {} edge mm74bv2mmugprobe matchprobes {} edge saureuscdf utils {} edge mgu74av2probe matchprobes {} edge htratfocuscdf utils {} edge mm74av1mmenstprobe matchprobes {} edge mm430mmensecdf utils {} edge dmgenome1dmensgprobe matchprobes {} edge drzebrafishdrentrezgcdf utils {} edge mgu74ccdf utils {} edge mm74cv2mmugcdf utils {} edge hu6800subccdf utils {} edge hs133ahsenseprobe matchprobes {} edge hs133xhsenstprobe matchprobes {} edge mmex10stv1mmugprobe matchprobes {} edge rnex10stv1rnrefseqcdf utils {} edge mouse4302cdf utils {} edge hs133av2ptensgcdf utils {} edge paeg1aprobe matchprobes {} edge hs133xptensecdf utils {} edge mu19ksubacdf utils {} edge hs133av2ptentrezg utils {} edge hgu95ccdf utils {} edge mm430bmmentrezgcdf utils {} edge hsfocusptentrezgcdf utils {} edge ath1attair utils {} edge ggchickenggenst utils {} edge wheatcdf utils {} edge celegansprobe matchprobes {} edge hgu95cprobe matchprobes {} edge vitisviniferaprobe matchprobes {} edge hgu95av2probe matchprobes {} edge drosgenome1probe matchprobes {} edge hs133av2hsensgcdf utils {} edge rn230brnentrezgprobe matchprobes {} edge mm430bmmentrezgprobe matchprobes {} edge hs133bptentrezgprobe matchprobes {} edge rn230brnentrezgcdf utils {} edge hs133xhsensecdf utils {} edge hs133av2hsentrezg utils {} edge osriceosrefseqcdf utils {} edge hgfocuscdf utils {} edge test2cdf utils {} edge hs133aptensgprobe matchprobes {} edge mmex10stv1mmugcdf utils {} edge rn34arnenstprobe matchprobes {} edge rnex10stv1rnenst utils {} edge dmdrosophila2dmense utils {} edge mm74av1mmense utils {} edge rn230arnug utils {} edge rn230rnenst utils {} edge mm11ksubbmmensgprobe matchprobes {} edge drzebrafishdrentrezgprobe matchprobes {} edge rn34arnentrezgcdf utils {} edge hs95av2ptensgcdf utils {} edge hsex10stv2ptentrezgprobe matchprobes {} edge hs133av2hsug utils {} edge mm74bv2mmrefseqcdf utils {} edge hs95av2ptentrezg utils {} edge dmgenome1dmug utils {} edge mgu74cv2cdf utils {} edge rn34arnugcdf utils {} edge dmdrosophila2dmensg utils {} edge mm74av1mmensg utils {} edge mm74av1mmenseprobe matchprobes {} edge hs133bhsugcdf utils {} edge mm430bmmenst utils {} edge hs133av2hsenstprobe matchprobes {} edge hs133phsensgprobe matchprobes {} edge hs95av2hsensgcdf utils {} edge mu11ksubacdf utils {} edge hs133xhsenseprobe matchprobes {} edge ggchickenggrefseqprobe matchprobes {} edge porcinecdf utils {} edge u133x3pprobe matchprobes {} edge mm11ksubbmmrefseqprobe matchprobes {} edge hs95av2hsentrezg utils {} edge hu6800probe matchprobes {} edge hs133pptenstprobe matchprobes {} edge mm74bv2mmrefseqprobe matchprobes {} edge ath1attigrcdf utils {} edge mm74bv2mmenst utils {} edge vitisviniferacdf utils {} edge hsex10stv2ptensgcdf utils {} edge LogitBoost NONE {} edge XML methods {} edge RMySQL methods {} edge RMySQL DBI {} edge SSOAP methods {} edge SSOAP XML {} edge SSOAP RCurl {} edge RCurl methods {} }}